Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0983
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.7  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   9.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.9  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 607 DGTFVSCVRSPSARYV 560
           DGT + C++S  AR +
Sbjct: 251 DGTMIKCLKSRPARQI 266


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 607 DGTFVSCVRSPSARYV 560
           DGT + C++S  AR +
Sbjct: 251 DGTMIKCLKSRPARQI 266


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 553 KRSRTVPTENERTKRTFRQHLNARKRTPERKR*ISPFVHSS 675
           K  R V   NE+ +R   +    +++  E+++ I    HSS
Sbjct: 63  KELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSS 103


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 690 G*TCETRMNERRDSSFSLGRTFTCVQMLTE 601
           G  CE  +NE   +  S   T  CVQ++ +
Sbjct: 292 GPRCEGDINECLSNPCSNAGTLDCVQLVND 321


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 553 KRSRTVPTENERTKRTFRQHLNARKRTPERKR*ISPFVHSS 675
           K  R V   NE+ +R   +    +++  E+++ I    HSS
Sbjct: 214 KELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSS 254


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 553 KRSRTVPTENERTKRTFRQHLNARKRTPERKR*ISPFVHSS 675
           K  R V   NE+ +R   +    +++  E+++ I    HSS
Sbjct: 273 KELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSS 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,754
Number of Sequences: 336
Number of extensions: 2941
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)