Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0978
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 59 2e-09
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 59 2e-09
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 42 3e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 42 3e-04
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 32 0.31
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.72
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 1.7
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 29 2.9
AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormo... 29 2.9
AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical... 28 3.8
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 27 6.7
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 27 6.7
AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical ... 27 6.7
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 27 8.8
U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 27 8.8
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 58.8 bits (136), Expect = 2e-09
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 333 PCLKVHCSAGRVCEINEHGDAMCNCIKXCP-YETDSRRMVCANFNETWQSDCEVYRQRC 506
PC C G+ C + + G+ C CI CP + D VCAN N+T+ S C++YR+RC
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERC 110
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 58.8 bits (136), Expect = 2e-09
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 333 PCLKVHCSAGRVCEINEHGDAMCNCIKXCP-YETDSRRMVCANFNETWQSDCEVYRQRC 506
PC C G+ C + + G+ C CI CP + D VCAN N+T+ S C++YR+RC
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERC 110
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 342 KVHCSAGRVCEINEHGDAMCNCIKXCP-YETDSRRMVCANFNETWQSDCEVYRQRCFAST 518
K C C + E+ A C C CP YE + + VC T+ S+C + + C S
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574
Query: 519 TLISA 533
+++A
Sbjct: 575 FVMTA 579
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 333 PCLKVHCSAGRVCEINEHGDAMCNCIKXCPYETDSRRMVCANFNETWQSDCEVYRQRC 506
PC K+ C C + A C C C D R VCA ET+ ++CE+ ++ C
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 423
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +3
Query: 333 PCLKVHCSAGRVCEINEHGD---AMCNCIKXCPYETDSRRM--VCANFNETWQSDCEVYR 497
PC + C G C +N+ A C C CP DS VC++ +QS C +
Sbjct: 217 PCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLRH 276
Query: 498 QRCFASTTL 524
C + T +
Sbjct: 277 HACESKTNI 285
Score = 30.3 bits (65), Expect = 0.95
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 351 CSAGRVCEINEHGDAMCNCIKXCPYETDSRRMVCANFNETWQSDCEVYRQRCFASTTL 524
C +VC + D C+ CP TD + VC + +T+ ++C + C A +
Sbjct: 448 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNI 500
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +3
Query: 333 PCLKVHCSAGRVCEINEHGDAMCNCIKXCPYETDSRRMVCANFNETWQSDCEVYRQRC 506
PC C G+ C++ C C + C T + VC +T+ ++C + C
Sbjct: 295 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 349
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 342 KVHCSAGRVCEINEHGDAMCNCIKXCP-YETDSRRMVCANFNETWQSDCEVYRQRCFAST 518
K C C + E+ A C C CP YE + + VC T+ S+C + + C S
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582
Query: 519 TLISA 533
+++A
Sbjct: 583 FVMTA 587
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 333 PCLKVHCSAGRVCEINEHGDAMCNCIKXCPYETDSRRMVCANFNETWQSDCEVYRQRC 506
PC K+ C C + A C C C D R VCA ET+ ++CE+ ++ C
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 431
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +3
Query: 333 PCLKVHCSAGRVCEINEHGD---AMCNCIKXCPYETDSRRM--VCANFNETWQSDCEVYR 497
PC + C G C +N+ A C C CP DS VC++ +QS C +
Sbjct: 225 PCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLRH 284
Query: 498 QRCFASTTL 524
C + T +
Sbjct: 285 HACESKTNI 293
Score = 30.3 bits (65), Expect = 0.95
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 351 CSAGRVCEINEHGDAMCNCIKXCPYETDSRRMVCANFNETWQSDCEVYRQRCFASTTL 524
C +VC + D C+ CP TD + VC + +T+ ++C + C A +
Sbjct: 456 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNI 508
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +3
Query: 333 PCLKVHCSAGRVCEINEHGDAMCNCIKXCPYETDSRRMVCANFNETWQSDCEVYRQRC 506
PC C G+ C++ C C + C T + VC +T+ ++C + C
Sbjct: 303 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 357
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.31
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 271 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRXVPTRQTPD 441
T+ ST S +++ +T+ + A ST++ + +S++T T T S +PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 442 AWCAQTSTKPGNRIAKY 492
+ S+ P N I Y
Sbjct: 369 I-TSTLSSLPDNAICSY 384
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.31
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 271 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRXVPTRQTPD 441
T+ ST S +++ +T+ + A ST++ + +S++T T T S +PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 442 AWCAQTSTKPGNRIAKY 492
+ S+ P N I Y
Sbjct: 369 I-TSTLSSLPDNAICSY 384
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 30.7 bits (66), Expect = 0.72
Identities = 22/67 (32%), Positives = 28/67 (41%)
Frame = +1
Query: 271 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRXVPTRQTPDAWC 450
TT +T + MK T +T T+ KST + KST T T + PT T
Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318
Query: 451 AQTSTKP 471
T T P
Sbjct: 319 KSTPTTP 325
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +1
Query: 199 EHIEHGMSESLDEKRYHEAK*PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKS 378
E+I E+LD+ + + ++T+ MK+ +T T+ KST + KS
Sbjct: 123 ENISDAKWETLDDNGKNYFVCSYDSRWATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKS 180
Query: 379 TNTETPCVTASRXVPTRQTPDAWCAQTSTKP 471
T T T + PT T T T P
Sbjct: 181 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 211
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = +1
Query: 271 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRXVPTRQTPDAWC 450
TT +T + MK T +T K+ +T + KST T T + PT T
Sbjct: 274 TTPTTPTTMKSTPTTPTTMKSTP--TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 331
Query: 451 AQTSTKP 471
T T P
Sbjct: 332 KSTPTTP 338
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 271 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRXVPTRQT 435
TT +T + MK T +T T+ KST + KST T T + PT T
Sbjct: 375 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 427
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 351 CSAGRVCEINEHGDAMCNCIKXCPYETDSRRMVCANFNET--WQSDCEVYRQRC 506
C G E + HG + C K CP T+ +C + ++T QS+C + +C
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKC 438
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 351 CSAGRVCEINEHGDAMCNCIKXCPYETDSRRMVCANFNET--WQSDCEVYRQRC 506
C G E + HG + C K CP T+ +C + ++T QS+C + +C
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKC 438
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/46 (26%), Positives = 15/46 (32%)
Frame = +3
Query: 351 CSAGRVCEINEHGDAMCNCIKXCPYETDSRRMVCANFNETWQSDCE 488
CS G C G+ MC C Y S C + C+
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCK 260
>AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 270 protein.
Length = 399
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -1
Query: 183 PAAELLRRWTFSSRGAD--PAVPTPHTLASAVQMTAI 79
P +++ RRW +SRG P+ + H+L ++ M A+
Sbjct: 15 PLSKISRRWNLNSRGGAIVPSSTSVHSLGHSISMLAV 51
>AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical
protein C15F1.1 protein.
Length = 360
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -1
Query: 192 RDVPAAELLRRWTFSSRGADPAVPTPHTLASAVQMTAITRANARRP 55
RD+P +L+R WT R A TL +Q R N P
Sbjct: 315 RDLPVHDLVREWTLLDRSTLQARLNMETLTHGMQEHTFIRYNKIEP 360
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -2
Query: 341 QARVFHVDFFVFI---LFIRDLVEKVVNSGYFASWYRFSSKLSDIPCSMC 201
+ V HV+F + L DL E V+ SG WY+ + I C C
Sbjct: 187 RVHVVHVNFIDYCSEWLESDDLEEDVMQSGTHGYWYKNRRNMRCIECQHC 236
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -2
Query: 341 QARVFHVDFFVFI---LFIRDLVEKVVNSGYFASWYRFSSKLSDIPCSMC 201
+ V HV+F + L DL E V+ SG WY+ + I C C
Sbjct: 187 RVHVVHVNFIDYCSEWLESDDLEEDVMQSGTHGYWYKNRRNMRCIECQHC 236
>AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical
protein Y18H1A.3 protein.
Length = 1258
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +1
Query: 343 KSTAAQDVSAKSTNTETPCVTASRXVPTRQTPDAWCAQTSTKPGNRIAKYTASDAL 510
+ +A VS K + ++PC SR V R D + KP + + +AL
Sbjct: 876 RQSAIISVSRKDFHAKSPCEITSRTVVGRHIWDLDTHEDVRKPATNVTNWLRKEAL 931
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +3
Query: 333 PCLKVHCSAGRVCEINEHGDAMCNCIK-XCPYETDSRRMVCANFNETWQSDCEVYRQRCF 509
PC + CSAG C + NC + C ++ VC N E C RC
Sbjct: 275 PCSTMKCSAGTECM-----EVQKNCTEPPCGFQG-----VCVNTTEVPVGGCAT--MRCS 322
Query: 510 ASTTLISAVVR 542
A TT A+V+
Sbjct: 323 AGTTCQEALVK 333
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +3
Query: 333 PCLKVHCSAGRVCEINEHGDAMCNCIK-XCPYETDSRRMVCANFNETWQSDCEVYRQRCF 509
PC + CSAG C + NC + C ++ VC N E C RC
Sbjct: 340 PCSTMKCSAGTECM-----EVQKNCTEPPCGFQG-----VCVNTTEVPVGGCAT--MRCS 387
Query: 510 ASTTLISAVVR 542
A TT A+V+
Sbjct: 388 AGTTCQEALVK 398
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +3
Query: 402 NCI--KXCPYE-TDSRRMVCANFNETWQSDCEVYRQRCFAS 515
NCI + C TD + +CA+ T+++ C+ +Q+C S
Sbjct: 579 NCISKEACQMPCTDDKHPICASDFSTYENLCQFRKQKCLDS 619
>Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical
protein F44D12.2 protein.
Length = 342
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Frame = +3
Query: 333 PCLKVHCSAGRV----CEINEHGDAMCNC 407
P ++ C G V C +N HG+ MC C
Sbjct: 59 PTIQKGCVIGEVAPEGCRVNHHGNVMCFC 87
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical protein
T16G12.1 protein.
Length = 1890
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 395 GVSVFVDFA-DTSCAAVDFQARVFHVDFFVFILFIRDLVEKVVNSGYFASW 246
G+ + +FA + + +DF F DF + L + L E +N+G +W
Sbjct: 1235 GMEQYGEFALNVTAGTIDFMENYFSYDFPLKKLDVMALPEYTMNAGAMENW 1285
>U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical
protein C31H1.5 protein.
Length = 315
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 336 CLKVHCSA-GRVCEINEHGD-AMCNCIKXCPYETDSRRMVCANF 461
C VH S + + E D CNC++ T R +CA+F
Sbjct: 72 CCAVHDSCYDNIAQTQEGCDNKFCNCLRNAMTSTKDRYFMCADF 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,318,328
Number of Sequences: 27780
Number of extensions: 199469
Number of successful extensions: 799
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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