Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0977
         (544 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128208-1|AAI28209.1|  368|Homo sapiens PLCH2 protein protein.        31   2.6  
AK000003-1|BAA92228.1|  235|Homo sapiens FLJ00003 protein protein.     31   2.6  
BC042145-1|AAH42145.1|  837|Homo sapiens zinc fingers and homeob...    30   4.6  
AB083653-1|BAC76615.1|  837|Homo sapiens transcription factor ZH...    30   4.6  
AB020661-1|BAA74877.2|  868|Homo sapiens KIAA0854 protein protein.     30   4.6  
AC005005-2|AAD15618.1| 1056|Homo sapiens WUGSC:H_DJ412A9.2 protein.    30   6.0  

>BC128208-1|AAI28209.1|  368|Homo sapiens PLCH2 protein protein.
          Length = 368

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = -2

Query: 324 SNSPPGSVLEPDHAGVLNGDERFPTSPLCTLGTKHRAPADIIDRAPLPPNRV 169
           + SP G +  P+H  V     + P  PLC+L T    PA      P PP  V
Sbjct: 194 TRSPAGDIFNPEHHHVHQDMTQRPLPPLCSLETIAEEPAP--GPGPPPPAAV 243


>AK000003-1|BAA92228.1|  235|Homo sapiens FLJ00003 protein protein.
          Length = 235

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 25/81 (30%), Positives = 34/81 (41%)
 Frame = -2

Query: 324 SNSPPGSVLEPDHAGVLNGDERFPTSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVV 145
           S+  PGS  +P HA V     R  + P    G     P +++ R    P+  S  T    
Sbjct: 50  SSHTPGS-RQPGHASVPTARARTLSPPQHRCGFACLGPREVVGRTSGHPSMQS--TPGFT 106

Query: 144 VFQRRSRETISHLCYTSHVSL 82
               R RET S LC+  H +L
Sbjct: 107 FGNLRVRETSSRLCHKLHQNL 127


>BC042145-1|AAH42145.1|  837|Homo sapiens zinc fingers and
           homeoboxes 2 protein.
          Length = 837

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 24/87 (27%), Positives = 38/87 (43%)
 Frame = -2

Query: 366 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFPTSPLCTLGTKHRAPADIIDRAP 187
           LG     LT V   S +   S +    AGV N  ++    PL T           I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK---RPLVTPQAAPEPKRPHIAQVP 427

Query: 186 LPPNRVSNETMKVVVFQRRSRETISHL 106
            PP +V+N  +     +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454


>AB083653-1|BAC76615.1|  837|Homo sapiens transcription factor ZHX2
           protein.
          Length = 837

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 24/87 (27%), Positives = 38/87 (43%)
 Frame = -2

Query: 366 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFPTSPLCTLGTKHRAPADIIDRAP 187
           LG     LT V   S +   S +    AGV N  ++    PL T           I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK---RPLVTPQAAPEPKRPHIAQVP 427

Query: 186 LPPNRVSNETMKVVVFQRRSRETISHL 106
            PP +V+N  +     +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454


>AB020661-1|BAA74877.2|  868|Homo sapiens KIAA0854 protein protein.
          Length = 868

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 24/87 (27%), Positives = 38/87 (43%)
 Frame = -2

Query: 366 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFPTSPLCTLGTKHRAPADIIDRAP 187
           LG     LT V   S +   S +    AGV N  ++    PL T           I + P
Sbjct: 402 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK---RPLVTPQAAPEPKRPHIAQVP 458

Query: 186 LPPNRVSNETMKVVVFQRRSRETISHL 106
            PP +V+N  +     +++++E I+HL
Sbjct: 459 EPPPKVANPPLTPASDRKKTKEQIAHL 485


>AC005005-2|AAD15618.1| 1056|Homo sapiens WUGSC:H_DJ412A9.2 protein.
          Length = 1056

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 25/73 (34%), Positives = 33/73 (45%)
 Frame = -2

Query: 387 SVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFPTSPLCTLGTKHRAPA 208
           S LA  ++G L  S +  P    +  GSVL P   G++      P SP  TLG  + AP 
Sbjct: 116 SSLAPTSVGQLVMSASAGPKPPPATTGSVLAPTSLGLVMPASAGPRSPPVTLG-PNLAPT 174

Query: 207 DIIDRAPLPPNRV 169
              D+   PP  V
Sbjct: 175 S-RDQKQEPPASV 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,714,528
Number of Sequences: 237096
Number of extensions: 2078825
Number of successful extensions: 5478
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5474
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)