Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0977
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 30 0.94
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 30 0.94
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical ... 28 3.8
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 28 5.0
Z81508-6|CAB04147.1| 338|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical pr... 27 8.7
U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF078789-1|AAK21515.1| 392|Caenorhabditis elegans Hypothetical ... 27 8.7
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 261 RFPTSPLCTLGTKHRAPADIIDRAPLPPNRVSNET 157
+ PTSP T+GT APA++ P N S+ T
Sbjct: 627 KLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTT 661
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 261 RFPTSPLCTLGTKHRAPADIIDRAPLPPNRVSNET 157
+ PTSP T+GT APA++ P N S+ T
Sbjct: 683 KLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTT 717
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 140 FSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 21
F DD K ++ S + ESSSTGSS +D P+P
Sbjct: 1429 FLDDEEKTITDNSSSASSEDSDSDESSSTGSSSSSDDPRP 1468
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 140 FSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 21
F DD K ++ S + ESSSTGSS +D P+P
Sbjct: 1429 FLDDEEKTITDNSSSASSEDSDSDESSSTGSSSSSDDPRP 1468
>AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical
protein ZC190.4 protein.
Length = 629
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = -2
Query: 234 LGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLCY 100
+GT+ + DIID +P N +S++ + +++ R ET++H+ +
Sbjct: 287 VGTR-KTSTDIIDGFNVPSNMISDDNLPALIY--RVIETLNHMIF 328
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = -3
Query: 137 SDDRAKRSPTYATP----LMSPYNARLESSSTGSSFPAD-SPKP 21
+DD R P + + L PY + SSS+ SS P+D +P+P
Sbjct: 681 NDDSDSRFPAFKSSSVAMLTEPYKSSSSSSSSTSSIPSDPAPRP 724
>Z81508-6|CAB04147.1| 338|Caenorhabditis elegans Hypothetical
protein F20E11.10 protein.
Length = 338
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -2
Query: 528 VIPVVTFWHLLLKTLYTKGSIGRAFAV 448
+IP++TFW L+ Y +G + F +
Sbjct: 259 IIPLLTFWFAFLEGYYNQGLVNFQFII 285
>Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical
protein C05B5.2 protein.
Length = 385
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 143 FFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPK 24
F+S+ A RS + P+MS + +++T + PA S K
Sbjct: 46 FYSNITAPRSTSVLAPVMSSLEVYINTTTTSAFAPAQSIK 85
>U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical
protein B0432.7 protein.
Length = 621
Score = 27.1 bits (57), Expect = 8.7
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +1
Query: 4 TTAKGTGLGESAGKEDPVELDSSLAL*GDMRGVA*VGDRFARSSLKNHYFHCFITYSVGR 183
TT+ + +S+ ++ LD AL G +R VA + DR R SLKN F+TY+
Sbjct: 37 TTSAARYVSDSSA-DNTTRLDE--ALNGMIRYVADM-DRATRLSLKNQQLKEFLTYTPVI 92
Query: 184 KRCAVDNIGGRTVF 225
+ NI R+ F
Sbjct: 93 LNASTTNIVTRSKF 106
>AF078789-1|AAK21515.1| 392|Caenorhabditis elegans Hypothetical
protein Y44E3B.2 protein.
Length = 392
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/71 (26%), Positives = 27/71 (38%)
Frame = -2
Query: 351 YSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFPTSPLCTLGTKHRAPADIIDRAPLPPNR 172
Y +PP + PP V + GV G E + P+C G D +AP +
Sbjct: 323 YLFCYIPPNNEHPPSCVSKVRRNGVCRGFEDY---PICYWGQCVDGRCDETVKAPKRLEK 379
Query: 171 VSNETMKVVVF 139
K+V F
Sbjct: 380 FKKFEKKIVPF 390
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,281,699
Number of Sequences: 27780
Number of extensions: 291640
Number of successful extensions: 920
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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