Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0976
(660 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 169 2e-44
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 169 3e-44
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 169 3e-44
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 27 0.12
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.1
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.1
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.1
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 6.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 6.0
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 169 bits (412), Expect = 2e-44
Identities = 80/88 (90%), Positives = 83/88 (94%)
Frame = +3
Query: 3 RRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 182
RRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA+IKEK D
Sbjct: 321 RRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCD 380
Query: 183 RRTGKSTEVNPKSIKSGDAAIVNLYLPS 266
RR GK+TE NPKSIKSGDAAIV L +PS
Sbjct: 381 RRNGKTTEENPKSIKSGDAAIVML-VPS 407
Score = 80.2 bits (189), Expect = 2e-17
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +2
Query: 251 LVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 370
LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 404 LVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 169 bits (410), Expect = 3e-44
Identities = 78/84 (92%), Positives = 80/84 (95%)
Frame = +3
Query: 3 RRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 182
RRGYVAGDSKN PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK D
Sbjct: 321 RRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCD 380
Query: 183 RRTGKSTEVNPKSIKSGDAAIVNL 254
RRTGK+TE NPKSIKSGDAAIV L
Sbjct: 381 RRTGKTTEENPKSIKSGDAAIVML 404
Score = 77.0 bits (181), Expect = 1e-16
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +2
Query: 251 LVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 370
L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAVGVIK+V F
Sbjct: 404 LQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSVTF 443
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 169 bits (410), Expect = 3e-44
Identities = 78/84 (92%), Positives = 80/84 (95%)
Frame = +3
Query: 3 RRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 182
RRGYVAGDSKN PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK D
Sbjct: 32 RRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCD 91
Query: 183 RRTGKSTEVNPKSIKSGDAAIVNL 254
RRTGK+TE NPKSIKSGDAAIV L
Sbjct: 92 RRTGKTTEENPKSIKSGDAAIVML 115
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 3 RRGYVAGDSKN 35
RRGYVAGDSKN
Sbjct: 264 RRGYVAGDSKN 274
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 477 KYRSCMKNCAVNSSSYFLPLVAFS 406
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 477 KYRSCMKNCAVNSSSYFLPLVAFS 406
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 477 KYRSCMKNCAVNSSSYFLPLVAFS 406
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 107 RLHTSLGLPHCPHC 148
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 6.0
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -2
Query: 191 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 12
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 11 TTT 3
T T
Sbjct: 137 TVT 139
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 6.0
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -2
Query: 191 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 12
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 11 TTT 3
T T
Sbjct: 137 TVT 139
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,144
Number of Sequences: 438
Number of extensions: 3874
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -