Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0975
         (371 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   1.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   1.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   7.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   7.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   7.1  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    20   9.4  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 80  ALFFDRCTAPVKLPAWQC 133
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 80  ALFFDRCTAPVKLPAWQC 133
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = -3

Query: 162  LKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKP 43
            L  PR P   H  +     A   S + +G  R     +KP
Sbjct: 916  LTSPRQPAETHAGSPCRNSASPASSDRSGTPRSTNGDRKP 955


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 231 YYRPRTASPN 260
           YY PR  SPN
Sbjct: 228 YYDPRALSPN 237


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +3

Query: 279 MRVVVFQRRSRETISHLC 332
           ++V+ +QR S++ ++ LC
Sbjct: 237 IKVLGYQRHSKQNVALLC 254


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 60  ELALGHLRYSLTDVPPQSNSP 122
           +L +G ++YS+  +  +SN P
Sbjct: 292 QLKIGEIKYSVNKLIFRSNDP 312


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 57  AELALGHLRYSLTDVP 104
           A+  LGHLR+   ++P
Sbjct: 7   AKPPLGHLRFKAPELP 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,498
Number of Sequences: 336
Number of extensions: 1915
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)