Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0975
(371 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0456 + 29521282-29522064 32 0.17
06_03_1448 + 30235336-30236763 31 0.38
06_03_1443 + 30182018-30183445 31 0.38
06_03_1440 + 30166515-30167942 31 0.38
06_03_1437 + 30151030-30152457 31 0.38
06_03_1429 + 30100834-30102261 31 0.38
06_03_1425 + 30084383-30085810 31 0.38
06_03_1420 - 30053713-30055140 31 0.38
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 29 1.5
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 29 1.5
05_05_0272 - 23738514-23738817,23739382-23740748 28 2.0
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 28 2.0
09_04_0597 - 18859601-18859818,18860914-18861083,18861250-188613... 28 2.7
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 28 2.7
06_03_0507 + 21603472-21603750,21604371-21604463,21605046-216053... 27 3.6
03_06_0411 + 33741903-33742163,33742990-33743168,33743342-337434... 27 3.6
01_06_1759 + 39689410-39689573,39689728-39689923,39690014-396901... 27 3.6
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 27 6.2
03_02_0763 - 10977793-10978092,10978896-10978996,10979580-109796... 27 6.2
09_03_0143 - 12723640-12723935,12723959-12724310 26 8.2
05_05_0175 + 22966151-22967614 26 8.2
01_01_0914 - 7208910-7209449,7209488-7209919 26 8.2
>01_06_0456 + 29521282-29522064
Length = 260
Score = 31.9 bits (69), Expect = 0.17
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +2
Query: 122 AWQC--PRTGSRGSFKRRRAFPPRHHSARLER----NTVRPPILSTA 244
AW+C P +G+RG +RRR P S R R +T+RP + S A
Sbjct: 12 AWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLRPYVTSAA 58
>06_03_1448 + 30235336-30236763
Length = 475
Score = 30.7 bits (66), Expect = 0.38
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 117 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASPNRVSNE 275
+PP L +L+ GD+R+ V LH W+E R YR +S + S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178
>06_03_1443 + 30182018-30183445
Length = 475
Score = 30.7 bits (66), Expect = 0.38
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 117 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASPNRVSNE 275
+PP L +L+ GD+R+ V LH W+E R YR +S + S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178
>06_03_1440 + 30166515-30167942
Length = 475
Score = 30.7 bits (66), Expect = 0.38
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 117 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASPNRVSNE 275
+PP L +L+ GD+R+ V LH W+E R YR +S + S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178
>06_03_1437 + 30151030-30152457
Length = 475
Score = 30.7 bits (66), Expect = 0.38
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 117 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASPNRVSNE 275
+PP L +L+ GD+R+ V LH W+E R YR +S + S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178
>06_03_1429 + 30100834-30102261
Length = 475
Score = 30.7 bits (66), Expect = 0.38
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 117 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASPNRVSNE 275
+PP L +L+ GD+R+ V LH W+E R YR +S + S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178
>06_03_1425 + 30084383-30085810
Length = 475
Score = 30.7 bits (66), Expect = 0.38
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 117 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASPNRVSNE 275
+PP L +L+ GD+R+ V LH W+E R YR +S + S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178
>06_03_1420 - 30053713-30055140
Length = 475
Score = 30.7 bits (66), Expect = 0.38
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 117 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASPNRVSNE 275
+PP L +L+ GD+R+ V LH W+E R YR +S + S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 189 TTLHAWNETPCARRYY 236
TT AW ETPCA R++
Sbjct: 560 TTTEAWVETPCAHRFH 575
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 181 RKRSSPFKTPA*SGSRTLPGGEFDWGGTSV 92
+KR P K PA S S+ LPG + + G SV
Sbjct: 339 KKRGRPRKYPAPSNSKHLPGTDTELGNDSV 368
>05_05_0272 - 23738514-23738817,23739382-23740748
Length = 556
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 9 GKSWLDPDVPREVSVLAELALGHLRYS-LTDVPPQSNSP 122
G S +D + P +++ + G RY+ +TDVPP N P
Sbjct: 377 GVSHVDAETPLKLAEYFNVTDGVFRYNQMTDVPPAVNGP 415
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 102 PPQSNSPPGSVLEPDHAGVLNGDE 173
P +NS P +V +PD +LNGDE
Sbjct: 739 PTSNNSVPQNVDQPDSKKMLNGDE 762
>09_04_0597 -
18859601-18859818,18860914-18861083,18861250-18861303,
18862759-18863284,18864465-18864663,18866787-18866852,
18866999-18867300,18867394-18867634,18867716-18867973,
18868076-18868207
Length = 721
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 367 LVWHCKET*EVSHKWEIVSRDRR*KTTTLIVSLLTRLG 254
++W C+ E S +E ++DR +TT + + L+RLG
Sbjct: 333 ILWPCQMEAERSRPYEPTAKDRIDETTPVCATHLSRLG 370
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 27.9 bits (59), Expect = 2.7
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 225 GRTVFRSKR--AEW*RGGNARRRLKLPRDPVRGHCQAGSLTGA 103
G+T+ R R A W RG A RR +LP G +AG G+
Sbjct: 36 GQTLTRGPRTCAVWRRGRAAVRRRRLPAASAEGGAKAGRSLGS 78
>06_03_0507 +
21603472-21603750,21604371-21604463,21605046-21605372,
21605588-21605863,21606095-21607114
Length = 664
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 107 PVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPP 229
P++LPA + P T + +R +AF +S R ++T RPP
Sbjct: 398 PLQLPAGEPPVTPAWNDTQRSKAFT---YSIRARKDTNRPP 435
>03_06_0411 +
33741903-33742163,33742990-33743168,33743342-33743426,
33743506-33743822,33743983-33744106,33744810-33744902,
33745296-33745364,33745654-33745704,33745705-33745854,
33745904-33746125,33746413-33746568,33746716-33746823,
33746992-33747126,33747209-33747364,33747544-33747664,
33748182-33748267
Length = 770
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 216 PCARRYYRPRTASPNRVSNETMRVVVFQRRSRETISHLCDTSH 344
P RR+ P ++SP+ S T RVV + + S + D+++
Sbjct: 18 PRRRRFPTPSSSSPSAASTSTSRVVRLRAAAASAPSEVLDSTN 60
>01_06_1759 +
39689410-39689573,39689728-39689923,39690014-39690103,
39690221-39690277,39690391-39690460,39690747-39690811,
39691408-39691462,39691704-39691831,39691919-39691950,
39692205-39692274,39692723-39692824,39692921-39693010,
39693084-39693232,39693620-39693731,39695332-39695412,
39695481-39695705,39695815-39695937,39696021-39696137
Length = 641
Score = 27.5 bits (58), Expect = 3.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 66 ALGHLRYSLTDVPPQSNSPPGSVLEP 143
ALGH+ L + P ++ PP ++P
Sbjct: 494 ALGHIELDLPEAPEKAPKPPAQAVDP 519
>10_08_0141 + 15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 48 SVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDER 176
++ A L G +R +L V PQ PP A V+ GD+R
Sbjct: 993 AIQARLHDGVIRVTLPGVKPQQQPPPAKTAAA--AAVVGGDQR 1033
>03_02_0763 -
10977793-10978092,10978896-10978996,10979580-10979648,
10979787-10979857,10979946-10980100,10980348-10980477,
10980946-10981013,10981335-10981592
Length = 383
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 114 NSPPGSVLEPDHAGVL--NGDERFRHVTTLHAWN 209
N+ PG + +H NG +RF H+ L++WN
Sbjct: 182 NAIPGRLYGGNHIDNADGNGGDRFGHLVDLYSWN 215
>09_03_0143 - 12723640-12723935,12723959-12724310
Length = 215
Score = 26.2 bits (55), Expect = 8.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 75 HLRYSLTDVPPQSN--SPPGSVLEPDHAGVLNGDERFRHVTTLHA 203
H+R +LTD+P N SP G ++E D A + N V T HA
Sbjct: 84 HVRLTLTDIPVPFNDPSPAGPLIEMD-AKMANA---IADVNTFHA 124
>05_05_0175 + 22966151-22967614
Length = 487
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 179 PPRHHSARLERNTVRPP 229
PPRHH + L+R PP
Sbjct: 281 PPRHHVSTLQRKESEPP 297
>01_01_0914 - 7208910-7209449,7209488-7209919
Length = 323
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -2
Query: 283 LIVSLLTRLGEAVRGR*YRRAHGVSFQACRVVTWRKRSSPFK 158
++ SL RL +A RG V + C VTW +PFK
Sbjct: 156 ILSSLNKRLVDASRGTWADELPAVQWGHCTSVTWATGFTPFK 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,602,372
Number of Sequences: 37544
Number of extensions: 267013
Number of successful extensions: 851
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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