Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0975
         (371 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D13969-1|BAA03074.1|  344|Homo sapiens Mel-18 protein protein.         28   8.4  
BC024255-1|AAH24255.1|  344|Homo sapiens polycomb group ring fin...    28   8.4  
BC004858-1|AAH04858.1|  344|Homo sapiens polycomb group ring fin...    28   8.4  
AL592114-6|CAH71228.1| 1048|Homo sapiens pleckstrin homology dom...    28   8.4  
AL592114-5|CAH71229.1| 1068|Homo sapiens pleckstrin homology dom...    28   8.4  
AB023186-1|BAA76813.2| 1091|Homo sapiens KIAA0969 protein protein.     28   8.4  

>D13969-1|BAA03074.1|  344|Homo sapiens Mel-18 protein protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 84  YSLTDVPPQSNSPPGSVLEPDHAGVLNGDE 173
           Y LT+VP  SN   G VLE +  G L+ DE
Sbjct: 101 YPLTEVPNGSNEDRGEVLEQE-KGALSDDE 129


>BC024255-1|AAH24255.1|  344|Homo sapiens polycomb group ring finger
           2 protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 84  YSLTDVPPQSNSPPGSVLEPDHAGVLNGDE 173
           Y LT+VP  SN   G VLE +  G L+ DE
Sbjct: 101 YPLTEVPNGSNEDRGEVLEQE-KGALSDDE 129


>BC004858-1|AAH04858.1|  344|Homo sapiens polycomb group ring finger
           2 protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 84  YSLTDVPPQSNSPPGSVLEPDHAGVLNGDE 173
           Y LT+VP  SN   G VLE +  G L+ DE
Sbjct: 101 YPLTEVPNGSNEDRGEVLEQE-KGALSDDE 129


>AL592114-6|CAH71228.1| 1048|Homo sapiens pleckstrin homology domain
           containing, family A member 6 protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 134 PRTGSRGSFKRRRAFPP-RHHSARLER 211
           PR+ S+GS+ R R + P R  SAR ER
Sbjct: 457 PRSPSQGSYSRARIYSPVRSPSARFER 483


>AL592114-5|CAH71229.1| 1068|Homo sapiens pleckstrin homology domain
           containing, family A member 6 protein.
          Length = 1068

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 134 PRTGSRGSFKRRRAFPP-RHHSARLER 211
           PR+ S+GS+ R R + P R  SAR ER
Sbjct: 477 PRSPSQGSYSRARIYSPVRSPSARFER 503


>AB023186-1|BAA76813.2| 1091|Homo sapiens KIAA0969 protein protein.
          Length = 1091

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 134 PRTGSRGSFKRRRAFPP-RHHSARLER 211
           PR+ S+GS+ R R + P R  SAR ER
Sbjct: 500 PRSPSQGSYSRARIYSPVRSPSARFER 526


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,252,703
Number of Sequences: 237096
Number of extensions: 1384941
Number of successful extensions: 3762
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3762
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)