Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0975
         (371 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   3.5  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   3.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   4.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   6.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   8.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   8.2  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 326 VGDRLARSSLKNHYSHCFI 270
           + + LA   L+N Y  CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 326 VGDRLARSSLKNHYSHCFI 270
           + + LA   L+N Y  CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +3

Query: 36  PREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAG 155
           P   S+ + L+   +  +  +   Q NSP  +   P H+G
Sbjct: 34  PATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSG 73


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -2

Query: 187 TWRKRSSPFKTPA*SGSRTLPGGEFDWG 104
           +WR   S F     +G   + G  F WG
Sbjct: 227 SWRITHSYFMPDPLAGDYNIGGLNFQWG 254


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 95  RCTAPVKLPAW 127
           R  AP K+PAW
Sbjct: 62  RFKAPQKIPAW 72


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 95  RCTAPVKLPAW 127
           R  AP K+PAW
Sbjct: 62  RFKAPQKIPAW 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,895
Number of Sequences: 438
Number of extensions: 2289
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)