Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0965
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.2  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   3.7  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   3.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   3.7  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   3.7  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   6.5  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    23   8.5  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   8.5  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   8.5  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.5  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -3

Query: 95  NSSRTSRRRLQATL 54
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 355 LALRTGACRVWTGSGCGRCRVWSM 426
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 150 PYLPSIGFHGTRTLRQKR-KLFPDLSAASSGHFGLPRRTHDFKDE 19
           P +P  G+    T   K  KL     A+S+ H G P R+   +DE
Sbjct: 612 PQVPPAGYREDTTGSYKYGKLSSSGGASSTTHSGAPSRSQSDEDE 656


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 419 QTRHRPHPLPVQTRHAPVLRANPYSEVT 336
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 419 QTRHRPHPLPVQTRHAPVLRANPYSEVT 336
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
 Frame = -2

Query: 255 DEPARH---LHVHPSPEFSRSAESIRTPPQMRCSSRSEPY 145
           D+ A H   +   P P  + + E    PP++ C+   E Y
Sbjct: 26  DQEAEHGETVPATPEPSTTEATEEESPPPKIECTDPREVY 65


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -2

Query: 648 ELTVERRSYRIVPIAHETKPTRLTARKIRGRPENAGP-DPVRNVRRFRSVILNIYSF 481
           E  V+     I+P A  +KPT  T + I  +P    P D     ++F    L + SF
Sbjct: 29  ENVVQAEQLPILPTADSSKPTDDTVKAIAPQPRYLLPADFAVKNKKFTIGTLGVGSF 85


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -1

Query: 157 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 38
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -1

Query: 157 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 38
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 641 PLNGGRIESCRSRTKRNR 588
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,684
Number of Sequences: 2352
Number of extensions: 15656
Number of successful extensions: 33
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)