Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0965
         (661 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p pro...    30   3.2  
AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-P...    30   3.2  
AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-P...    30   3.2  
AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    29   7.4  
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    29   7.4  
AY122165-1|AAM52677.1|  387|Drosophila melanogaster LD24232p pro...    28   9.8  
AE014298-2749|AAF48868.1|  686|Drosophila melanogaster CG6632-PA...    28   9.8  

>AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p
           protein.
          Length = 589

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 431 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 330
           T++  TR     LP +T  +P     PYSEV  P
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP 106


>AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-PD,
           isoform D protein.
          Length = 589

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 431 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 330
           T++  TR     LP +T  +P     PYSEV  P
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP 106


>AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-PA,
           isoform A protein.
          Length = 589

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 431 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 330
           T++  TR     LP +T  +P     PYSEV  P
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP 106


>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 641 PLNGGRIESCRSRTK-RNRHDLRLGRSAEGRRTRVRIQS 528
           PL GGR  S RSR++ R+R   R      GR TR  ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 641 PLNGGRIESCRSRTK-RNRHDLRLGRSAEGRRTRVRIQS 528
           PL GGR  S RSR++ R+R   R      GR TR  ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712


>AY122165-1|AAM52677.1|  387|Drosophila melanogaster LD24232p
           protein.
          Length = 387

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 331 QLPTSLTYIILSTRGSSPWRPAADMGRTGATSPRTS 224
           QLPT+LT+ +LST G +    AA    T   +  T+
Sbjct: 308 QLPTNLTHTVLSTSGGATAAAAAGGNSTSVVAAGTA 343


>AE014298-2749|AAF48868.1|  686|Drosophila melanogaster CG6632-PA
           protein.
          Length = 686

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 331 QLPTSLTYIILSTRGSSPWRPAADMGRTGATSPRTS 224
           QLPT+LT+ +LST G +    AA    T   +  T+
Sbjct: 308 QLPTNLTHTVLSTSGGATAAAAAGGNSTSVVAAGTA 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,927,290
Number of Sequences: 53049
Number of extensions: 717638
Number of successful extensions: 2245
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2245
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)