Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0965
(661 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 29 0.052
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 2.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.0
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.4
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 6.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.0
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 7.9
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 28.7 bits (61), Expect = 0.052
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1
Query: 355 ILIPKLRIQLPTSLTYIILST-RGSSP-WRPAADMGRTGATSPRTSLT*IFKVRREYPD 185
+ +P+ R +P +LTYI L T RG SP P + + A + +++T +++ + D
Sbjct: 81 VTVPRWRNGIPATLTYISLDTNRGGSPKLTPYPNWAQNKAGACGSAITTAYRIHADSCD 139
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 626 RIESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 528
R SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 626 RIESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 528
R SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 626 RIESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 528
R SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 626 RIESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 528
R SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 626 RIESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 528
R SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 626 RIESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 528
R SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 615 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 514
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 615 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 514
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 615 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 514
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 393 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 491
K +RPV DV +C ++S LI LKN I
Sbjct: 42 KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 393 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 491
K +RPV DV +C ++S LI LKN I
Sbjct: 42 KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = -1
Query: 355 ILIPKLRIQLPTSLTYIILSTRGSSPWRPAADMGRTGATSPRTSLT 218
I + K R +L + ++ ++ + +SP P + TG++ P+ +L+
Sbjct: 328 IQLQKERDRLTAMMHHLHVAKQMASPEPPKSSESSTGSSIPKLNLS 373
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -2
Query: 156 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 73
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 626 RIESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 528
R SC SR + RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRS 258
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 639 VERRSYRIVPIAHETKPTRLTARKIRGRPEN 547
VE + Y+ V I+ T+P+ T + P N
Sbjct: 183 VEEQRYKQVEISQMTEPSSSTKSYVLEGPRN 213
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,128
Number of Sequences: 438
Number of extensions: 4822
Number of successful extensions: 27
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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