Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0963
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19157-3|CAA79566.3|  395|Caenorhabditis elegans Hypothetical pr...    36   0.035
Z36753-6|CAA85335.1|  103|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AF292050-1|AAG41146.1|  103|Caenorhabditis elegans 2I146 protein.      30   1.8  
Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AF162674-1|AAF80462.1|  575|Caenorhabditis elegans CNT-like nucl...    28   7.1  
AF100307-12|AAC68928.1|  338|Caenorhabditis elegans Hypothetical...    28   7.1  
AF000266-4|ABB51177.1|  403|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z19157-3|CAA79566.3|  395|Caenorhabditis elegans Hypothetical
           protein ZC84.4 protein.
          Length = 395

 Score = 35.5 bits (78), Expect = 0.035
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = -1

Query: 450 YCNRLWV*RHRPIWVVSYYLHLVVFCIHFQCLRYPYLF 337
           + NR+W+   + I ++SY++HL+ +     C+ YP +F
Sbjct: 275 FANRIWIMEKKSIIIISYFIHLLPY---ISCVAYPLIF 309


>Z36753-6|CAA85335.1|  103|Caenorhabditis elegans Hypothetical
           protein T09A5.7 protein.
          Length = 103

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +1

Query: 157 MNSIGEECTDLKKKYDDCFNTWFSERFLKGDQEILFALEYLKFIKNVLR 303
           M+SI  EC  LK+ YD CF T F ++F+  +    +A+   + + +V +
Sbjct: 6   MSSIFPECDHLKQIYDKCF-TEFFQKFITPNYRHQYAVNPCERLHDVYK 53


>AF292050-1|AAG41146.1|  103|Caenorhabditis elegans 2I146 protein.
          Length = 103

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +1

Query: 157 MNSIGEECTDLKKKYDDCFNTWFSERFLKGDQEILFALEYLKFIKNVLR 303
           M+SI  EC  LK+ YD CF T F ++F+  +    +A+   + + +V +
Sbjct: 6   MSSIFPECDHLKQIYDKCF-TEFFQKFITPNYRHQYAVNPCERLHDVYK 53


>Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.5 protein.
          Length = 645

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +3

Query: 207 LFQYLVLGKVLKRRSRDSVCAGIFKIYQECVKNAMKQQSIDFKEIDKDIL 356
           LF+ + L   + R   + +CA +F+   E V+ A++   +D  +ID+ +L
Sbjct: 288 LFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKSKIDEVVL 337


>Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.4 protein.
          Length = 645

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +3

Query: 207 LFQYLVLGKVLKRRSRDSVCAGIFKIYQECVKNAMKQQSIDFKEIDKDIL 356
           LF+ + L   + R   + +CA +F+   E V+ A++   +D  +ID+ +L
Sbjct: 288 LFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKSKIDEVVL 337


>Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical
           protein C13C12.1 protein.
          Length = 218

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 588 HLFYALISSFTQETS*VLTHSFSSFTVAYYH*NLGN 481
           H+F+ + S  TQ  + VL++SF  F   +YH +L N
Sbjct: 3   HMFFGVPSQDTQSVA-VLSYSFFKFLRIFYHFDLLN 37


>AF162674-1|AAF80462.1|  575|Caenorhabditis elegans CNT-like
           nucleoside transporter protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 374 VFIFSA*DILIYFFEINALLFHC-ILNTFLINFKYSSANRIS*SPFK 237
           VFIF++   LIYF  + ALLF+  I+   L   +++  + +    FK
Sbjct: 236 VFIFTSLQTLIYFSAVVALLFYFGIIQVVLQKSQWTEESNVKEEDFK 282


>AF100307-12|AAC68928.1|  338|Caenorhabditis elegans Hypothetical
           protein T12B5.2 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 414 IWVVSYYLHLVVFCIHFQC 358
           IWV ++   ++V+C HF+C
Sbjct: 232 IWVSNFDSAIIVYCFHFKC 250


>AF000266-4|ABB51177.1|  403|Caenorhabditis elegans Hypothetical
           protein W08F4.8b protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = +3

Query: 231 KVLKRRSRDSVCAGIFKIYQECVKNAMKQQSIDFKEIDKDILGTENEYKTPPNANS 398
           K   ++  ++V + +FK   EC +    +  ID+ +  KDI  +++E  T PN ++
Sbjct: 5   KFCVKKKGNTVISRVFKRDSECEEEKFSKMPIDYSKW-KDIEVSDDEDDTHPNIDT 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,933,427
Number of Sequences: 27780
Number of extensions: 311822
Number of successful extensions: 820
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)