Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0961
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   1.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   1.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   5.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   7.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   9.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   9.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 160 GRWPWKSESAKECATTHLPKQPAL 231
           GR  WK    +  AT  L K P+L
Sbjct: 79  GRKAWKHLDFRNSATAELLKNPSL 102


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 160 GRWPWKSESAKECATTHLPKQPAL 231
           GR  WK    +  AT  L K P+L
Sbjct: 79  GRKAWKHLDFRNSATAELLKNPSL 102


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = +2

Query: 59  VSRTGAVG*TKRSVKAPKKRSW 124
           ++    V  T + ++ PK+++W
Sbjct: 88  LNNNNVVSSTNQEIRGPKRKTW 109



 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 188 ADSDFHGHRPAVMSDQRLS 132
           A    H HRPA+   +R++
Sbjct: 299 AGGPLHDHRPALAQQRRVA 317


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 173 HGHRPAVMSDQRLSWCP 123
           +GH P V+ D+  + CP
Sbjct: 309 YGHTPNVVLDEEGNPCP 325


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 247 QRHPFSGLVASAG 209
           +RHPF+ L  SAG
Sbjct: 435 KRHPFAYLPFSAG 447


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 247 QRHPFSGLVASAG 209
           +RHPF+ L  SAG
Sbjct: 435 KRHPFAYLPFSAG 447


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,156
Number of Sequences: 336
Number of extensions: 2014
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)