Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0956
         (761 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015A62D6 Cluster: UPI00015A62D6 related cluster; n...    35   1.9  
UniRef50_Q4UBJ8 Cluster: Cobalamin synthesis protein, putative; ...    34   3.3  
UniRef50_Q9LR94 Cluster: T23E23.16; n=1; Arabidopsis thaliana|Re...    33   7.7  

>UniRef50_UPI00015A62D6 Cluster: UPI00015A62D6 related cluster; n=2;
           Danio rerio|Rep: UPI00015A62D6 UniRef100 entry - Danio
           rerio
          Length = 474

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = -1

Query: 749 ICDVILTGVLVVFFLISFLCVHLTGHSAFSAHRRSRTPLDCCSRRE 612
           +C  I +GV+V   L++F  +++  H     +RR +T   CC+  +
Sbjct: 421 LCVAIGSGVVVFILLVAFAIIYIRRHKQMMMYRRRKTRFCCCNNNK 466


>UniRef50_Q4UBJ8 Cluster: Cobalamin synthesis protein, putative;
           n=2; Theileria|Rep: Cobalamin synthesis protein,
           putative - Theileria annulata
          Length = 341

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 311 QKLLRVL*TSEITKHNVNTK-ASHCSNQTNK*SFKYLNNTIN*LLRKKSNIFRC 469
           +KLL     SE    +V TK  S C   +   S KY+N+TI+ LL +K +++RC
Sbjct: 225 KKLLSSHMNSEGISIHVQTKLTSICIKSSKVYSLKYINDTISSLLWEKDDVYRC 278


>UniRef50_Q9LR94 Cluster: T23E23.16; n=1; Arabidopsis thaliana|Rep:
           T23E23.16 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 653

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
 Frame = -1

Query: 755 YNICDVILTGV-LVVFFLISFLCVHL-------TGHSAFSAHRRSRTPLDCCS 621
           Y  CD+  T   +VVF L S++C+H        TGH  F +H R   PL CC+
Sbjct: 16  YCTCDLTQTSTCIVVFMLTSYICIHFLPLLSSPTGH--FISHYR---PLSCCN 63


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,662,318
Number of Sequences: 1657284
Number of extensions: 11131863
Number of successful extensions: 24588
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24583
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)