Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0956
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 28 0.11
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 4.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 7.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 7.1
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 7.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 7.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 7.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 7.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 7.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 7.1
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.4
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 27.9 bits (59), Expect = 0.11
Identities = 11/52 (21%), Positives = 27/52 (51%)
Frame = +2
Query: 20 LMWYIPTHFSSKYFLCDDISVRVLNAARIWTRTEKRKHLCKYSVCSWIFASR 175
L +++ HF SK F C+ S +N + + + + ++ +Y + +A++
Sbjct: 4 LEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATK 55
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 550 RKYLRLNIAFSSNTKQFESSTSRLEQQSSGVRER 651
+KY + + S T F+ ++SR ++ S R+R
Sbjct: 208 KKYATSSNSLRSRTHDFQHTSSRYSRERSCSRDR 241
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 550 RKYLRLNIAFSSNTKQFESSTSRLEQQSSGVRER 651
+KY + + S T F+ ++SR ++ S R+R
Sbjct: 197 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDR 230
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 550 RKYLRLNIAFSSNTKQFESSTSRLEQQSSGVRER 651
+KY + + S T F+ ++SR ++ S R+R
Sbjct: 197 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDR 230
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 550 RKYLRLNIAFSSNTKQFESSTSRLEQQSSGVRER 651
+KY + + S T F+ ++SR ++ S R+R
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDR 241
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 550 RKYLRLNIAFSSNTKQFESSTSRLEQQSSGVRER 651
+KY + + S T F+ ++SR ++ S R+R
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDR 241
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 550 RKYLRLNIAFSSNTKQFESSTSRLEQQSSGVRER 651
+KY + + S T F+ ++SR ++ S R+R
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDR 241
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 550 RKYLRLNIAFSSNTKQFESSTSRLEQQSSGVRER 651
+KY + + S T F+ ++SR ++ S R+R
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDR 241
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 550 RKYLRLNIAFSSNTKQFESSTSRLEQQSSGVRER 651
+KY + + S T F+ ++SR ++ S R+R
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDR 241
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 550 RKYLRLNIAFSSNTKQFESSTSRLEQQSSGVRER 651
+KY + + S T F+ ++SR ++ S R+R
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDR 241
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 550 RKYLRLNIAFSSNTKQFESSTSRLEQQSSGVRER 651
+KY + + S T F+ ++SR ++ S R+R
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDR 241
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = -1
Query: 605 LSNCFVFELNAILSRKYFRSLVKPQKLNDFFKQSEFLRSGCY 480
++N + +N S KY R P+ D+F + L + Y
Sbjct: 194 MNNIETYIVNTNYSSKYMREYNDPEYKLDYFMEDVELNAYYY 235
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,236
Number of Sequences: 438
Number of extensions: 3417
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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