Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0952
(322 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0630 - 20097672-20097772,20097983-20102012 32 0.087
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111 31 0.15
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 31 0.20
06_01_0350 + 2534422-2535615 31 0.27
01_06_1198 + 35341375-35341635,35341750-35341953,35342151-353427... 28 1.9
03_05_0565 + 25667391-25667696 27 2.5
01_01_0012 + 71903-72935,73468-73981,74619-76008 27 2.5
03_01_0038 - 340564-341108,341214-341463,341546-341649,341728-34... 27 3.3
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 27 4.3
02_02_0590 - 11894721-11895188,11895684-11895851 27 4.3
02_02_0588 - 11881567-11881657,11882339-11882616,11883927-118840... 27 4.3
11_05_0087 + 18970741-18972702 26 5.7
03_01_0563 + 4169144-4169516,4170362-4170648,4171339-4171576,417... 26 5.7
01_07_0257 - 42343493-42343528,42344215-42344271,42344272-423443... 26 5.7
01_06_0456 + 29521282-29522064 26 5.7
08_01_0683 + 5991905-5992055,5993262-5993451,5993701-5993772,599... 26 7.6
05_05_0149 - 22733703-22736216 26 7.6
04_04_0964 - 29749624-29749649,29749742-29749945,29750036-297506... 26 7.6
03_02_0784 - 11154395-11154888,11155284-11155360,11155447-111554... 26 7.6
01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853 26 7.6
>07_03_0630 - 20097672-20097772,20097983-20102012
Length = 1376
Score = 32.3 bits (70), Expect = 0.087
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -1
Query: 298 EALHLGDLLRIWVRTARHLHVHPSPEFSRSAESIRTPPQMRCS-SRSEPYLPSIGFHGTR 122
E LH D+ + W + A + HP E S E IR P + R+ +P +G G
Sbjct: 213 ETLHKIDMSK-WTQQAIEVSPHPENEKSNKVEYIRHPHDSAVTYLRNPAVIPIVGISGVG 271
Query: 121 TLRQKRKLFPDLSAASSGHFG 59
+ +F D + HFG
Sbjct: 272 KSALAKFIFDDANVRE--HFG 290
>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
Length = 553
Score = 31.5 bits (68), Expect = 0.15
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -1
Query: 289 HLGDLLRIWVRTARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRT-LR 113
HL +++ + RH V SP R+ + RT P R + R PSI +RT +
Sbjct: 240 HLANVVNQGLTQTRHTSVRVSPSVGRTVSATRTTPATR-AGRGMSNAPSIQIPQSRTRFK 298
Query: 112 QKRKLFPDLSAASSGHFG 59
+ P + + FG
Sbjct: 299 RVGATSPGIVTLNDNQFG 316
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 31.1 bits (67), Expect = 0.20
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Frame = -1
Query: 232 PSPEFSRSA-ESIRTPPQM------RCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAAS 74
P P+ SRS ES R P S + + GFHG L+ KL PDL +
Sbjct: 168 PPPKRSRSKQESSRASPMKLIKLYPHMSGEQKRLIEGAGFHGLVDLKCS-KLRPDLCSWL 226
Query: 73 SGHFGLPRRTLVFKDEGTI 17
HF LVF G I
Sbjct: 227 MEHFNPATNQLVFPGRGAI 245
>06_01_0350 + 2534422-2535615
Length = 397
Score = 30.7 bits (66), Expect = 0.27
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 134 PWNSNAQAEKKTLPGPLGGVFRP 66
PW S+A+ E+K LP PL +F P
Sbjct: 42 PWRSSARLERKLLPPPLPWLFLP 64
>01_06_1198 +
35341375-35341635,35341750-35341953,35342151-35342737,
35342825-35342986,35343096-35343549
Length = 555
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 274 LRIWVRTARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPS 143
LR + T H H P SA R P ++ S PYLP+
Sbjct: 428 LRAVITTYEGKHNHDVPAARGSAALYRPAPPAAAATSSHPYLPN 471
>03_05_0565 + 25667391-25667696
Length = 101
Score = 27.5 bits (58), Expect = 2.5
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 271 RIWVRTARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGT 125
RI++ A H H SP +R A++ S+ +EP P HGT
Sbjct: 40 RIFMADAAHPPRHRSPPLARRADAASPRRSCSGSASAEPQAPVEEPHGT 88
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 259 RTARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSI 140
+ AR PSP RS R+P + R S RS Y P +
Sbjct: 509 KDARGKSRSPSPSARRSKSRSRSPIKYRRSRRSRSYSPPV 548
>03_01_0038 -
340564-341108,341214-341463,341546-341649,341728-343255,
343995-344056,344578-344728
Length = 879
Score = 27.1 bits (57), Expect = 3.3
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 316 TLFYRLEALHLGDLLRIWVRTARHLHVHPSPEFSRSAESIRTPPQMRCSS-RSEPYL 149
++FY HL D+L T +H VH S+S + + PQ SS RS P L
Sbjct: 464 SIFYEEAKKHLTDILEYNSHTTKHPTVHT----SKSLIGMLSLPQRNASSPRSSPRL 516
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 26.6 bits (56), Expect = 4.3
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 259 RTARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEP 155
R+A H P E SRSA R+P + R SRS P
Sbjct: 230 RSASRSH-SPVKERSRSASQSRSPVKERSPSRSPP 263
>02_02_0590 - 11894721-11895188,11895684-11895851
Length = 211
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 18 IVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCL 116
++ S + V GN P +E+ G ++L CL
Sbjct: 70 VIQSPINLQVEHGNDLTPTSVSEKPGNNYLPCL 102
>02_02_0588 -
11881567-11881657,11882339-11882616,11883927-11884066,
11884713-11884839
Length = 211
Score = 26.6 bits (56), Expect = 4.3
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = -2
Query: 273 CGYGYERRDISTYIPHLNFQGP--QRVSGHRRKCGALRVPNHISLL*DSMELERSGRK-- 106
C Y YE DI++ HL + P +V H R + VP++ +L +L+ + K
Sbjct: 62 CPYCYEDHDITSLCAHLEDEHPFESKVVRHHR-LRRVAVPSNHALSLGGRDLQETYLKVL 120
Query: 105 -ENSSRTS 85
NSSR+S
Sbjct: 121 LGNSSRSS 128
>11_05_0087 + 18970741-18972702
Length = 653
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 120 VRVPWNPIEGRYGSEREEHR 179
VR P P+ GR+G RE R
Sbjct: 56 VRAPRRPLHGRHGHHREHRR 75
>03_01_0563 +
4169144-4169516,4170362-4170648,4171339-4171576,
4172473-4172796,4172914-4172999,4173124-4173231,
4173315-4173619,4173733-4173960,4174109-4174877
Length = 905
Score = 26.2 bits (55), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 205 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 107
+S R P R ++PYLPS G R LR+K
Sbjct: 205 QSTRELPTKRVFFSNKPYLPSETPPGLRELREK 237
>01_07_0257 -
42343493-42343528,42344215-42344271,42344272-42344316,
42344374-42344518,42344606-42344733,42344939-42345044,
42345113-42345189,42345264-42345361,42345945-42346058,
42346154-42346294,42346418-42346502,42346721-42346849
Length = 386
Score = 26.2 bits (55), Expect = 5.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 279 TCCGYGYERRDISTYIPHLNFQGP 208
+CCG+ +PHLN GP
Sbjct: 135 SCCGFEEVLERYRQIVPHLNLSGP 158
>01_06_0456 + 29521282-29522064
Length = 260
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 121 TLRQKRKLFPDLSAASSGHFGLPRRTL 41
TLR+ ++FP +S++ G FG+ R L
Sbjct: 171 TLRRHHQVFPHISSSCQGCFGVRRYIL 197
>08_01_0683 +
5991905-5992055,5993262-5993451,5993701-5993772,
5994016-5994084,5994189-5994260,5994440-5994511,
5994623-5994694,5994777-5994848,5995276-5995347,
5995452-5995526,5995929-5996005,5996417-5996781,
5996872-5997070,5997151-5997309,5997391-5997509,
5997624-5997641,5997701-5997851,5997959-5998190,
5998272-5998422,5998517-5998876
Length = 915
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 233 MYVEMSRRSYPYPQQVSKVKSL 298
MY++ S S P+P +SK+K L
Sbjct: 209 MYIDSSGFSGPFPSTISKLKKL 230
>05_05_0149 - 22733703-22736216
Length = 837
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 145 KGDMVRNAKSTAFAAVSGYSLRTLKIQVRDVRGDVAPFVPISAAGLQGE 291
K +++ F+++ G KI D + D F P AA LQGE
Sbjct: 691 KNVLLKGELENRFSSLCGIQEEISKIATLD-KSDEVHFTPFQAAKLQGE 738
>04_04_0964 -
29749624-29749649,29749742-29749945,29750036-29750634,
29750742-29750826,29750914-29751562,29751568-29751643,
29753891-29753957,29754097-29754998,29756579-29756790
Length = 939
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 145 SIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDE 26
S G H L K+ L+AASSG LP VF ++
Sbjct: 22 SRGCHHVNVLPMSGKIMLPLTAASSGSVALPCDAPVFTEK 61
>03_02_0784 -
11154395-11154888,11155284-11155360,11155447-11155497,
11155599-11155672,11156127-11156215,11156533-11156618,
11157570-11157669,11158540-11158622,11158776-11159194
Length = 490
Score = 25.8 bits (54), Expect = 7.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -1
Query: 307 YRLEALHLGDLLRIWVRTARHLHV----HPSPEFSRSAESIRTPPQMRCSSRSEPYL 149
Y LEA+ DL I V RH +P+PE + +PP + SS + PYL
Sbjct: 357 YNLEAISQSDL-PISVSGRRHNSSSNSNNPAPEAGGQITLMSSPPISQQSSSAPPYL 412
>01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853
Length = 625
Score = 25.8 bits (54), Expect = 7.6
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -1
Query: 322 LPTLFYRLEALHLGDLLRIWVRTARHLHVHPSPEFSRSAES-IRTPPQMRCSSRSEPYLP 146
+P+L +E HL V + H P P+ S R PP R S RSE P
Sbjct: 12 MPSLLADVEVSHLAGFD---VTPSPHAEPSPRPQLRHDNPSRSRVPPLERVSRRSEVVFP 68
Query: 145 SI 140
+
Sbjct: 69 PL 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,446,911
Number of Sequences: 37544
Number of extensions: 193387
Number of successful extensions: 746
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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