Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0952
(322 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein LO... 31 1.0
BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein LO... 31 1.0
AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein. 31 1.0
AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein. 31 1.0
EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3 pr... 29 2.4
AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively sp... 29 2.4
AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein. 29 2.4
AK057456-1|BAB71495.1| 166|Homo sapiens protein ( Homo sapiens ... 28 5.4
AF169196-1|AAG43399.1| 303|Homo sapiens tight junction protein ... 28 5.4
U08998-1|AAB50581.2| 366|Homo sapiens TAR RNA binding protein 2... 28 7.2
M60801-1|AAA36765.1| 345|Homo sapiens TAR RNA binding protein p... 28 7.2
DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated... 28 7.2
BC114371-1|AAI14372.1| 714|Homo sapiens FERM domain containing ... 28 7.2
AL109749-2|CAI42080.1| 594|Homo sapiens novel protein protein. 28 7.2
AK127686-1|BAC87084.1| 401|Homo sapiens protein ( Homo sapiens ... 28 7.2
AK125336-1|BAC86135.1| 714|Homo sapiens protein ( Homo sapiens ... 28 7.2
AK124902-1|BAC85988.1| 1168|Homo sapiens protein ( Homo sapiens ... 28 7.2
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 28 7.2
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 28 7.2
AC016689-1|AAX88865.1| 571|Homo sapiens unknown protein. 28 7.2
AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant prot... 28 7.2
BC129999-1|AAI30000.1| 216|Homo sapiens LOC730112 protein protein. 27 9.5
>BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 117 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 248
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 117 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 248
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein.
Length = 587
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 117 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 248
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein.
Length = 423
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 117 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 248
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3
protein.
Length = 727
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -1
Query: 244 LHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGH 65
L SPE A + P + SS+ Y IG + TLR+ +++ +
Sbjct: 168 LRAKTSPE---GARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASG 224
Query: 64 FGLPRRTLVFKD 29
GLP +L KD
Sbjct: 225 VGLPGGSLPIKD 236
>AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively
spliced PDZ-motif protein ZASP-4 protein.
Length = 330
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -1
Query: 244 LHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGH 65
L SPE A + P + SS+ Y IG + TLR+ +++ +
Sbjct: 168 LRAKTSPE---GARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASG 224
Query: 64 FGLPRRTLVFKD 29
GLP +L KD
Sbjct: 225 VGLPGGSLPIKD 236
>AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein.
Length = 734
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -1
Query: 244 LHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGH 65
L SPE A + P + SS+ Y IG + TLR+ +++ +
Sbjct: 175 LRAKTSPE---GARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASG 231
Query: 64 FGLPRRTLVFKD 29
GLP +L KD
Sbjct: 232 VGLPGGSLPIKD 243
>AK057456-1|BAB71495.1| 166|Homo sapiens protein ( Homo sapiens
cDNA FLJ32894 fis, clone TESTI2004994. ).
Length = 166
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 164 FRTISPFYRIPWNSNAQAEKKTLPGP 87
F + SP +R+PW S A A LP P
Sbjct: 105 FFSSSPSHRVPWGSCASASAPRLPVP 130
>AF169196-1|AAG43399.1| 303|Homo sapiens tight junction protein
ZO-1 protein.
Length = 303
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 232 PSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPD 89
PSP +S A+S+RTP PS+ H T ++ +P+
Sbjct: 120 PSPSYSPQADSLRTPSTEAAHIMLRDQEPSLSSHVDPTKVYRKDPYPE 167
>U08998-1|AAB50581.2| 366|Homo sapiens TAR RNA binding protein 2
protein.
Length = 366
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 120 VRVPWNPIEGRYGSERE--EHRICGGVRILSADLENSGEGCTW 242
+RV P++ R G+E E + GV L N G GCTW
Sbjct: 223 LRVHTVPLDARDGNEVEPDDDHFSIGVGFRLDGLRNRGPGCTW 265
>M60801-1|AAA36765.1| 345|Homo sapiens TAR RNA binding protein
protein.
Length = 345
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 120 VRVPWNPIEGRYGSERE--EHRICGGVRILSADLENSGEGCTW 242
+RV P++ R G+E E + GV L N G GCTW
Sbjct: 202 LRVHTVPLDARDGNEVEPDDDHFSIGVGFRLDGLRNRGPGCTW 244
>DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated
protein protein.
Length = 5005
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -1
Query: 229 SPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASS 71
S + SRS E++ P+ R S S PY PS + + Q R + +S A S
Sbjct: 1342 SSDVSRSDENVLDSPKQRRSFGSFPYTPSA---DSNSFHQYRSMDSSMSMADS 1391
>BC114371-1|AAI14372.1| 714|Homo sapiens FERM domain containing 7
protein.
Length = 714
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 134 PWNSNAQAEKKTLPGPLGGVFRPLWVTPS 48
P S +Q++ KT+ P G FRPL P+
Sbjct: 587 PKRSQSQSDMKTIRFPFGSEFRPLGPCPA 615
>AL109749-2|CAI42080.1| 594|Homo sapiens novel protein protein.
Length = 594
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 134 PWNSNAQAEKKTLPGPLGGVFRPLWVTPS 48
P S +Q++ KT+ P G FRPL P+
Sbjct: 467 PKRSQSQSDMKTIRFPFGSEFRPLGPCPA 495
>AK127686-1|BAC87084.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ45784 fis, clone NETRP2006468. ).
Length = 401
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -1
Query: 229 SPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASS 71
S + SRS E++ P+ R S S PY PS + + Q R + +S A S
Sbjct: 328 SSDVSRSDENVLDSPKQRRSFGSFPYTPSA---DSNSFHQYRSMDSSMSMADS 377
>AK125336-1|BAC86135.1| 714|Homo sapiens protein ( Homo sapiens
cDNA FLJ43346 fis, clone NT2RI3008652, moderately
similar to Homo sapiens mRNA for CDEP. ).
Length = 714
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 134 PWNSNAQAEKKTLPGPLGGVFRPLWVTPS 48
P S +Q++ KT+ P G FRPL P+
Sbjct: 587 PKRSQSQSDMKTIRFPFGSEFRPLGPCPA 615
>AK124902-1|BAC85988.1| 1168|Homo sapiens protein ( Homo sapiens cDNA
FLJ42912 fis, clone BRHIP3024533. ).
Length = 1168
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -1
Query: 229 SPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASS 71
S + SRS E++ P+ R S S PY PS + + Q R + +S A S
Sbjct: 1095 SSDVSRSDENVLDSPKQRRSFGSFPYTPSA---DSNSFHQYRSMDSSMSMADS 1144
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 293 SSPWRPAADMGTNGATSPRTSLT 225
S+PW D+GT+G SP S T
Sbjct: 13296 STPWTSTVDLGTSGTPSPVPSPT 13318
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 293 SSPWRPAADMGTNGATSPRTSLT 225
S+PW D+GT+G SP S T
Sbjct: 14232 STPWTSTVDLGTSGTPSPVPSPT 14254
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 293 SSPWRPAADMGTNGATSPRTSLT 225
S+PW D+GT+G SP S T
Sbjct: 14858 STPWTSTVDLGTSGTPSPVPSPT 14880
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 293 SSPWRPAADMGTNGATSPRTSLT 225
S+PW D+GT+G SP S T
Sbjct: 19224 STPWTSTVDLGTSGTPSPVPSPT 19246
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 293 SSPWRPAADMGTNGATSPRTSLT 225
S+PW D+GT+G SP S T
Sbjct: 19536 STPWTSTVDLGTSGTPSPVPSPT 19558
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 293 SSPWRPAADMGTNGATSPRTSLT 225
S+PW D+GT+G SP S T
Sbjct: 4846 STPWTSTVDLGTSGTPSPVPSPT 4868
>AC016689-1|AAX88865.1| 571|Homo sapiens unknown protein.
Length = 571
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -1
Query: 238 VHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFG 59
+HP PE + S PQ S + P+L GF + + + P S +SG F
Sbjct: 249 LHPRPESYSTGHSPIMIPQHPSQSGTFPFLHKAGF--SSSYKNSGCFIPPQSELTSGLFE 306
Query: 58 LPRRTLVFKDE 26
++F+DE
Sbjct: 307 DEDFAVLFQDE 317
>AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant
protein.
Length = 1264
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 226 PEFSRSAESIRTPPQMRCSSRSEPYLPSIGF 134
P + +A S +P Q+ S R EP LP GF
Sbjct: 89 PSWPLNARSSSSPTQLGNSRRGEPTLPESGF 119
>BC129999-1|AAI30000.1| 216|Homo sapiens LOC730112 protein protein.
Length = 216
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 243 STYIPHLNFQGPQRVSGHRRKCGALR 166
ST+IP LN Q P + G+ C LR
Sbjct: 5 STFIPGLNPQNPHYIPGYTGHCPLLR 30
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,209,095
Number of Sequences: 237096
Number of extensions: 1001181
Number of successful extensions: 3373
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3373
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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