Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0952
         (322 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   1.6  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   2.1  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   3.7  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   3.7  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   3.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   3.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   4.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   4.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   6.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   6.4  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   8.4  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 94  PDLSAASSGHFGLPRRTLVFK 32
           PDL+  S G  GLP   L  +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 163 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 80
           SE   P+   HG R  RQ+ +   D  +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 140 RIPWNSNAQAEKKTLPGPLG 81
           +IPW+ N +A  K   G  G
Sbjct: 334 QIPWDKNVEALAKWANGQTG 353


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -2

Query: 276 CCGYGYERRDIS 241
           CCG GY+ ++++
Sbjct: 117 CCGRGYKTQEVT 128


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -2

Query: 276 CCGYGYERRDIS 241
           CCG GY+ ++++
Sbjct: 118 CCGRGYKTQEVT 129


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 49  DGVTQSGLKTPPRGPG 96
           DG     L +PPR PG
Sbjct: 128 DGPPSVSLSSPPREPG 143


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 190 VSGYSLRTLKIQVRDVR 240
           V+  ++  LKIQ+RDV+
Sbjct: 14  VNAMTIEELKIQLRDVQ 30


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 76  TPPRGPGRV 102
           +PPRGPG V
Sbjct: 397 SPPRGPGGV 405


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = -1

Query: 229 SPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFH 131
           SP  S  +  +R      CS  + P+   + FH
Sbjct: 331 SPMTSTKSTIVRNHLNSTCSVTNSPHQKKLRFH 363


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 289 HLGDLLRIWVRTARHLHVHPSPEFSRSAESIRTPPQ 182
           +L + LRI ++    +   P+P   R   SI T P+
Sbjct: 809 YLPNSLRILLKRFLDITTPPTPNLLRYFASIATNPK 844


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 45  VRRGNPKWPEDAAERSGK 98
           VRR +P W +   E+  K
Sbjct: 169 VRREHPFWDDQRVEQEAK 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,932
Number of Sequences: 438
Number of extensions: 2254
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)