Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0950
         (374 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          24   1.6  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    24   1.6  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    22   8.7  

>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 205 RTSFSYLAGWKNHCS 249
           R  F+   GWKNHC+
Sbjct: 115 RHGFNAWYGWKNHCN 129


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 205 RTSFSYLAGWKNHCS 249
           R  F+   GWKNHC+
Sbjct: 115 RHGFNAWYGWKNHCN 129


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +1

Query: 88  MSGRPATSPSCPTALRSPEAFTIVPSSKASLNW 186
           +SG   +SP  PT   SP+        K+   W
Sbjct: 165 VSGSDMSSPGAPTGSSSPQITPRPTPVKSPYEW 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 324,252
Number of Sequences: 2352
Number of extensions: 5871
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)