Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0950
         (374 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070586-1|AAL48057.1|  421|Drosophila melanogaster RE68879p pro...    27   5.9  
AY058364-1|AAL13593.1|  293|Drosophila melanogaster GH13672p pro...    27   5.9  
AE013599-2150|AAF58085.1|  293|Drosophila melanogaster CG8314-PA...    27   5.9  
BT022214-1|AAY54630.1|  446|Drosophila melanogaster IP12388p pro...    27   7.9  
BT021252-1|AAX33400.1|  553|Drosophila melanogaster RE60459p pro...    27   7.9  
AE014297-2215|AAN13711.1|  698|Drosophila melanogaster CG14897-P...    27   7.9  
AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-P...    27   7.9  

>AY070586-1|AAL48057.1|  421|Drosophila melanogaster RE68879p
           protein.
          Length = 421

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 228 RQVRKRRPVLHLQSPIQRCLGARYDRERLGRPQ 130
           R+  +RRPV   QSP  RC G R   +R  R Q
Sbjct: 178 RRPTERRPVRRSQSPRDRCHGGRDLDQRRQRNQ 210


>AY058364-1|AAL13593.1|  293|Drosophila melanogaster GH13672p
           protein.
          Length = 293

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 238 NHCSLVCQRCCRRIQH 285
           +HCS VCQRC R++ H
Sbjct: 135 HHCS-VCQRCIRKMDH 149


>AE013599-2150|AAF58085.1|  293|Drosophila melanogaster CG8314-PA
           protein.
          Length = 293

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 238 NHCSLVCQRCCRRIQH 285
           +HCS VCQRC R++ H
Sbjct: 135 HHCS-VCQRCIRKMDH 149


>BT022214-1|AAY54630.1|  446|Drosophila melanogaster IP12388p
           protein.
          Length = 446

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 57  RLERCNEPRVDVRKTGDFTIVSNGLAVSRGVH 152
           RL   N  R D R+T DF +VSNG       H
Sbjct: 33  RLTVTNRIRSDKRETLDFNVVSNGECTVNTTH 64


>BT021252-1|AAX33400.1|  553|Drosophila melanogaster RE60459p
           protein.
          Length = 553

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 197 IYNRQFNDALELGTI-VNASGDRKAVGHDGEVAGLPDIYSW 78
           IYN+   D + L  + ++A+G R  + H G++     +Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>AE014297-2215|AAN13711.1|  698|Drosophila melanogaster CG14897-PA,
           isoform A protein.
          Length = 698

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 197 IYNRQFNDALELGTI-VNASGDRKAVGHDGEVAGLPDIYSW 78
           IYN+   D + L  + ++A+G R  + H G++     +Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-PB,
           isoform B protein.
          Length = 1298

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 197 IYNRQFNDALELGTI-VNASGDRKAVGHDGEVAGLPDIYSW 78
           IYN+   D + L  + ++A+G R  + H G++     +Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,655,415
Number of Sequences: 53049
Number of extensions: 233494
Number of successful extensions: 818
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)