Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0946
(552 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 33 1e-04
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.005
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.010
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.010
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.051
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.12
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.16
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.27
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 31 0.63
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 29 1.9
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 29 2.5
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.5
SB_19226| Best HMM Match : I-set (HMM E-Value=0) 29 3.3
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 29 3.3
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 28 4.4
SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_30377| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 28 5.8
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 27 7.7
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 27 7.7
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 94.7 bits (225), Expect = 4e-20
Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 4/93 (4%)
Frame = +1
Query: 1 KIFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT 180
K SDGL+GLYRGF +S GII+YR YFG YDT + +L ++ +VIS+ + VT
Sbjct: 165 KTIASDGLVGLYRGFVISCVGIIVYRGFYFGLYDTLKPILLG-EDAGVVISFVLGYGVTV 223
Query: 181 VAGIISYPFDTVRRRMMMQSGRAKR----ISCT 267
AG+ SYP DT+RRRMMM SG A + I CT
Sbjct: 224 SAGLASYPIDTIRRRMMMTSGEAVKYKGSIDCT 256
Score = 47.2 bits (107), Expect = 9e-06
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +3
Query: 252 EDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKV 404
E + YK +I C I K EG + KGA +N+LRG GA VL +D+ K++
Sbjct: 245 EAVKYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGFDKFKEL 295
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 33.5 bits (73), Expect(2) = 1e-04
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 KIFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDT-ARGMLP 123
KI++ +GL G ++G G ++ I+ Y A+ F Y+ +G+ P
Sbjct: 600 KIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGIAP 641
Score = 29.1 bits (62), Expect(2) = 1e-04
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 139 PIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSG 243
P+V VA +YP D VRRRM M+ G
Sbjct: 680 PVVAKLFCGAVAGAVAQSGTYPLDVVRRRMQMERG 714
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 4 IFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGMLPDPKNTPIVISWA-IAQTVTT 180
++K +G+ ++G GVS + Y A+ + ++ L DP N + S + +A T +T
Sbjct: 104 VYKREGIKAFWKGNGVSCIRLFPYSAVQYAAFNRIVASLEDPHNGELSDSGSMLAGTSST 163
Query: 181 VAGIIS-YPFDTVRRRMMMQ 237
+ +++ YP + ++ R+ +Q
Sbjct: 164 LIAMVTVYPCEVIKTRLTVQ 183
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +1
Query: 4 IFKSDGLIGLYRGFGVSVQGIIIYRA---LYFGFYDTARGMLPDPKNTPIVISWAIAQTV 174
I + +G++ LY+G S G+ + L + D +P TPI + +
Sbjct: 202 ILREEGILALYKGVTPSFLGLFPFAGGSFLAYQILDKVDSTRTEPSATPICM-FVNGCVA 260
Query: 175 TTVAGIISYPFDTVRRRMMMQSGRAKRIS 261
A +S+PFDT+R++M + +G+ IS
Sbjct: 261 GAFAHTLSHPFDTIRKKMQL-TGKEVSIS 288
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 4 IFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGM-LPDPKNTP----IVISWAIAQ 168
I++ +G+ YRG S+ GII Y + Y+T + L KN +++ A
Sbjct: 276 IYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETLKNFYLNYHKNQSADPGVLVLLACGT 335
Query: 169 TVTTVAGIISYPFDTVRRRMMMQS 240
+T + SYP VR R+ Q+
Sbjct: 336 ASSTCGQLASYPLSLVRTRLQAQA 359
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +1
Query: 10 KSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG 189
K++G+ L++G G ++ G+ RA+YF Y + ML I T + +A
Sbjct: 786 KNEGIQSLFKGLGTTLLGVTPSRAIYFAIYSKLKDMLNKSGALGKADGSLIHMTSSAIAA 845
Query: 190 IISY----PFDTVRRRMMMQSGRAKRISCTRTPSTA 285
I++ P ++ R+ +++ R S + S A
Sbjct: 846 FINHTVTNPLWFIKTRLQLENQGGTRASAFKIVSMA 881
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 4 IFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGML--PDPKNTPIVISWAIAQTVT 177
+FK++G+ +Y+G + + + ++ G YD + M D +N I+ A + T
Sbjct: 76 LFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMYGDTDVQNPKILKKIAASITTG 135
Query: 178 TVAGIISYPFDTVRRRMMMQSGR 246
+A ++ P + V+ R +GR
Sbjct: 136 IMAVSVAQPTEVVKIRFQADAGR 158
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 255 DILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLV-LYDEIK 398
D Y+ + T+ KTEG +KG + R A + + LYD++K
Sbjct: 63 DAHYRGMLGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVK 111
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 36.3 bits (80), Expect = 0.017
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 255 DILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 353
D YK+T+H +++I K EG +KG + N+L+
Sbjct: 197 DFAYKSTLHAFSSIVKLEGFRGLYKGMWPNILK 229
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 130 KNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRA 249
+ P+ V+ +YP D VRRRM M+ RA
Sbjct: 157 RELPVNFKLMCGSLAGAVSQTATYPLDVVRRRMQMKGIRA 196
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 34.7 bits (76), Expect = 0.051
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = +1
Query: 1 KIFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGMLPDPKN------TPIVISWAI 162
K+F S+GL G +RG ++ I ALYFG + +L PK +PI + ++
Sbjct: 306 KVFHSEGLRGCFRGMAITTTRDIPAFALYFGSFQYVCELL-TPKGEHVDNLSPIRLFFS- 363
Query: 163 AQTVTTVAGIISYPFDTVR 219
T++ I++YP D V+
Sbjct: 364 GGIAGTLSWILTYPVDMVK 382
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/86 (25%), Positives = 41/86 (47%)
Frame = +1
Query: 1 KIFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT 180
+I K + ++GLY+G + G+ + A+ FG L IS AIA V +
Sbjct: 200 QIIKRESVLGLYKGMASPLAGLGLINAIIFGVQGETLRRLNGSGTMAQAISGAIAGGVQS 259
Query: 181 VAGIISYPFDTVRRRMMMQSGRAKRI 258
I+ P + + R+ +Q G+ +++
Sbjct: 260 ---IVCCPMELAKTRVQVQ-GQGQKL 281
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 KIFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGMLPDPKNTPIVISWAIAQTVT- 177
+I +G+ GLY+G S+ I + + YD + D ++ + +
Sbjct: 78 RIHIEEGIRGLYKGLVPSLVSIAPFLGVQQSVYDIMKLRALDSAFAANSGTFLVCGAIAG 137
Query: 178 TVAGIISYPFDTVRRRMMMQSGRAKRISCT 267
+A + +P D VRR+M + GR+ I+ T
Sbjct: 138 MIAQTVVHPLDVVRRQMQVDRGRSGSITQT 167
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 33.1 bits (72), Expect = 0.16
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +1
Query: 4 IFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGMLP-----DPKNTPI--VISWAI 162
+FK +G+ YR + + I ++ L+F Y+ AR L DPK I + A+
Sbjct: 42 VFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKTHVIAGATAGAV 101
Query: 163 AQTVTTVAGIISYPFDTVRRRMMMQSGRAK 252
A +TT + +T R ++ G K
Sbjct: 102 ASAITTPLDVAKTLLNTQERSVVNLVGTPK 131
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 32.3 bits (70), Expect = 0.27
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 KIFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT 180
K+++S GL G ++G V+ I A+YFG Y+ + + V ++ +A
Sbjct: 84 KLYRSRGLAGCFQGNTVTAVRDIPGFAVYFGVYELLCDWFSNLFGSRGVATYLMAGGFAG 143
Query: 181 VAGIIS-YPFDTVRRRMMMQSGRAK 252
V S +PFD ++ R+ K
Sbjct: 144 VVSWASTFPFDVIKSRIQADGNLGK 168
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 31.1 bits (67), Expect = 0.63
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +1
Query: 4 IFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV 183
I ++ G+ G Y+G ++ I +FGFY+ + +L T +S T +
Sbjct: 254 IAQTYGIRGCYQGLSATLVRNIPANGFFFGFYEFTKNLLTPEGGTVNDVSPLGLLTSGAM 313
Query: 184 AG----IISYPFDTVRRRMM 231
G ++YP D V+ MM
Sbjct: 314 GGFFYWFLTYPTDLVKSSMM 333
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 ILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRG-TGGAFVLVLYDEIKKVL 407
I Y+N H TIA+T G ++G + ++R F Y+ K +L
Sbjct: 242 IQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGFFFGFYEFTKNLL 292
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 1 KIFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTARGMLPD 126
K+ +++G IGLYRG + G+ +A+ D RG+ D
Sbjct: 963 KVVRNEGPIGLYRGLLPQLLGVSPEKAIKLTTNDFVRGIFSD 1004
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 1 KIFKSDGLIGLYRGFGVSVQGIIIYRALYFGFYDTAR 111
+I++ +G+ YRG+ ++ GI+ Y + F Y+T +
Sbjct: 34 RIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCK 70
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 4 IFKSDGLI-GLYRGFGVSVQGIIIYRALYFGFYDTARGML 120
++K DG+ GLYRG ++ + A+ FG Y+ + L
Sbjct: 222 VYKDDGIRRGLYRGLSINYLRVCPQVAIMFGVYEVTKQFL 261
>SB_19226| Best HMM Match : I-set (HMM E-Value=0)
Length = 1500
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 391 SSYKTSTKAPPVPLRTLEKAP--LKKAEVPSVLAMVAQQWMVFLYRISS 251
S Y TST+ VPL T E P L+ A+ P+ QW V +++
Sbjct: 249 SPYHTSTRMLTVPLITPESKPWILRFADEPADTTFAHTQWAVLTCHVAA 297
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 258 ILYKNTIHCWATIAKTEGTSAFFKGAF 338
+ Y+N H TIAK EG A KG F
Sbjct: 46 VYYRNVFHASYTIAKYEGILAMQKGLF 72
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 28.3 bits (60), Expect = 4.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 4 IFKSDGLIGLYRGFGVSVQGIIIY 75
I++ +G+ G YRGFG + ++Y
Sbjct: 337 IYQQEGIFGFYRGFGALLIQCVVY 360
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +1
Query: 55 VQGIIIYRALYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT-----VAGIISYPFDTVR 219
+Q +++ + + G Y R DP T + + V V +I YPF+TV
Sbjct: 240 IQHLVLIKMGHTGLYGDTRDCNEDPPPTSDMTQSYYPELVANFMAFVVPDLILYPFETVL 299
Query: 220 RRMMMQSGR 246
R+ +Q R
Sbjct: 300 HRLYIQGTR 308
>SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = -3
Query: 409 YRTFLISSYKTSTKAPPVPLRTLEKAPLKKAEVPSVLAMVAQQWMVFLYRISSWHDQTAS 230
Y T L + P P+ E + P + A QW VF ++ W D T
Sbjct: 181 YPTLLENIVIRGILPPDYPITERETYKAQPPNPPEIPARPLPQWTVFDCSLTQWPDNT-D 239
Query: 229 SCAY 218
+C Y
Sbjct: 240 TCEY 243
>SB_30377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = -3
Query: 439 KLW*QFLR*IYRTFLISS----YKTSTKAPPVPLRTLEKAP-LKKA--EVPSVLAMVAQQ 281
K+W Q++ + R +L+ Y T + L+ + + +K+A +P+VL V ++
Sbjct: 203 KVW-QYITLMRRIYLVDCPGVVYPTGDTETEIILKGVVRVENVKEAAEHIPTVLERVKRE 261
Query: 280 WMVFLYRISSWHDQT 236
++ YR+ +W D T
Sbjct: 262 YLAKTYRVQAWDDCT 276
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 27.9 bits (59), Expect = 5.8
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Frame = +1
Query: 1 KIFKSDG-LIGLYRGFG------VSVQGIIIYRALYF-GFYDTARGMLP--DPKNTPIVI 150
+IF ++G ++ LYRGF + GI Y F F+ +G+L P+ V+
Sbjct: 45 QIFMTEGGMVALYRGFTPTSLSMIPAVGIGFYAFESFKDFFVAMKGVLTRIHPETGETVL 104
Query: 151 SWAIAQTVTTVAGIIS----YPFDTVRRRMMM 234
+ +AG S YP D VRRRM +
Sbjct: 105 TAPGGLLCGALAGATSQTLAYPLDVVRRRMQL 136
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -3
Query: 406 RTFLISSYKTSTKAPPVPLRTLEKAPLKKAEVPSVLAMVAQQWMVFLYRISSWHDQTASS 227
++ L+ +Y+ K L TLE + KK E LA Q+ V + +S + S+
Sbjct: 772 KSALMQAYEDEVKLSKEKLETLESSNKKKDENFDKLAAERQELSVIVDDLSKQLESYISN 831
Query: 226 CA 221
CA
Sbjct: 832 CA 833
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 252 EDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVL 377
E +YKN+ C+ I + EG F+G +L VL
Sbjct: 76 EPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTVL 117
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -1
Query: 204 GIGDDTGDCGYGLS-DGPADYNG 139
G GD +G CGYG S G DY G
Sbjct: 179 GGGDYSGGCGYGSSYGGGGDYGG 201
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,179,589
Number of Sequences: 59808
Number of extensions: 289681
Number of successful extensions: 783
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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