Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0945
         (362 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015233-1|AAT94462.1|  158|Drosophila melanogaster RE06269p pro...    27   7.4  
AE014298-1335|AAN09252.2|  158|Drosophila melanogaster CG15316-P...    27   7.4  
AE014298-1334|AAF46497.3|  158|Drosophila melanogaster CG15316-P...    27   7.4  

>BT015233-1|AAT94462.1|  158|Drosophila melanogaster RE06269p
          protein.
          Length = 158

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 83 SLKKIFTYFIKLFIIIFRSKILFILIK 3
          +L K FTY+   FII FRS   +I I+
Sbjct: 6  ALFKCFTYYNTKFIIAFRSTSFYISIR 32


>AE014298-1335|AAN09252.2|  158|Drosophila melanogaster
          CG15316-PB, isoform B protein.
          Length = 158

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 83 SLKKIFTYFIKLFIIIFRSKILFILIK 3
          +L K FTY+   FII FRS   +I I+
Sbjct: 6  ALFKCFTYYNTKFIIAFRSTSFYISIR 32


>AE014298-1334|AAF46497.3|  158|Drosophila melanogaster
          CG15316-PA, isoform A protein.
          Length = 158

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 83 SLKKIFTYFIKLFIIIFRSKILFILIK 3
          +L K FTY+   FII FRS   +I I+
Sbjct: 6  ALFKCFTYYNTKFIIAFRSTSFYISIR 32


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,633,369
Number of Sequences: 53049
Number of extensions: 113402
Number of successful extensions: 249
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)