Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0942
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   3.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   4.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.5  

>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 340 R*LFSQKKTGTYNNIICFVFT 278
           R LF QK TG+ N ++  V+T
Sbjct: 41  RDLFRQKITGSENCLVLNVYT 61


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = +3

Query: 252 WVIKLRLAIVNTKQMILLYVPVF 320
           W++++   +  TKQ+++ +V V+
Sbjct: 136 WIVEIGGWLAFTKQLLIKFVEVY 158


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 266 KFYYPLYKL 240
           + YYP+YKL
Sbjct: 71  RLYYPIYKL 79


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 266 KFYYPLYKL 240
           + YYP+YKL
Sbjct: 71  RLYYPIYKL 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,518
Number of Sequences: 336
Number of extensions: 1952
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)