Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0942
         (423 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy pro...    31   0.45 
AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical ...    31   0.45 
AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical ...    31   0.45 
AC006743-1|AAF60503.1|  255|Caenorhabditis elegans Hypothetical ...    28   2.4  
Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z81062-1|CAB02945.2|  365|Caenorhabditis elegans Hypothetical pr...    28   3.2  
U40419-8|AAA81428.3|  673|Caenorhabditis elegans Hypothetical pr...    26   9.7  
U21324-3|AAA62565.2|  166|Caenorhabditis elegans Hypothetical pr...    26   9.7  

>AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy
           protein 9 protein.
          Length = 947

 Score = 30.7 bits (66), Expect = 0.45
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 301 NIICFVFTMARRSFITHCINYF*IFVSKNKT 209
           +++ F+F M+  +F T C+NY  +F + N T
Sbjct: 162 SLLQFIFVMSFTTFFTQCVNYQFLFANTNVT 192


>AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical
           protein T22H9.2b protein.
          Length = 719

 Score = 30.7 bits (66), Expect = 0.45
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 301 NIICFVFTMARRSFITHCINYF*IFVSKNKT 209
           +++ F+F M+  +F T C+NY  +F + N T
Sbjct: 162 SLLQFIFVMSFTTFFTQCVNYQFLFANTNVT 192


>AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical
           protein T22H9.2a protein.
          Length = 880

 Score = 30.7 bits (66), Expect = 0.45
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 301 NIICFVFTMARRSFITHCINYF*IFVSKNKT 209
           +++ F+F M+  +F T C+NY  +F + N T
Sbjct: 162 SLLQFIFVMSFTTFFTQCVNYQFLFANTNVT 192


>AC006743-1|AAF60503.1|  255|Caenorhabditis elegans Hypothetical
           protein Y38C1BA.1 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 205 IWFSYRCMYIFYFQQKRFYVCDF 137
           +WF Y+C++I +   + F  C+F
Sbjct: 57  LWFIYQCIHIIFIHTRIFQNCNF 79


>Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical
           protein T02E1.3b protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 194 TEPNICFIFADENLKIVYTMGNKTSSRHCEHKTNDIIICSSFF 322
           TE   C +F  + LKI  T+     S  C   T+  + CS  F
Sbjct: 581 TEKPKCSMFDFDTLKIAETLKEPLQSSECSTTTSSKMTCSPMF 623


>Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical
           protein T02E1.3a protein.
          Length = 646

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 194 TEPNICFIFADENLKIVYTMGNKTSSRHCEHKTNDIIICSSFF 322
           TE   C +F  + LKI  T+     S  C   T+  + CS  F
Sbjct: 548 TEKPKCSMFDFDTLKIAETLKEPLQSSECSTTTSSKMTCSPMF 590


>Z81062-1|CAB02945.2|  365|Caenorhabditis elegans Hypothetical
           protein F15A4.1 protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 303 LYVPVFFCENSHLNCLSRFYFAVVERQNVSVVTYRTYL 416
           LY+PVF   ++HL  L+  YF +  R    + T   +L
Sbjct: 166 LYIPVFLITSTHLITLTFSYFVLTNRTGFYLGTSPCFL 203


>U40419-8|AAA81428.3|  673|Caenorhabditis elegans Hypothetical
           protein C27F2.1 protein.
          Length = 673

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/49 (20%), Positives = 26/49 (53%)
 Frame = +2

Query: 170 IKYIHTPITEPNICFIFADENLKIVYTMGNKTSSRHCEHKTNDIIICSS 316
           + +I   +T P+  +   + N+   + +G K S +  +H+T+ + + +S
Sbjct: 576 VTWISWSLTNPSGFYTIHNSNIITYWDLGFKLSPKSVDHRTDSVQVLAS 624


>U21324-3|AAA62565.2|  166|Caenorhabditis elegans Hypothetical
           protein C35D10.8 protein.
          Length = 166

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 243 FIQWVIKLRLAIVNTKQMILLYVP 314
           F QWV + R AI N + +++ Y P
Sbjct: 53  FGQWVTRARRAIFNERNLLVTYQP 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,892,141
Number of Sequences: 27780
Number of extensions: 164237
Number of successful extensions: 366
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)