Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0941
         (691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX649592-6|CAO03500.1| 1266|Homo sapiens plexin B2 protein.            30   8.9  
BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein.            30   8.9  
AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein.             30   8.9  

>BX649592-6|CAO03500.1| 1266|Homo sapiens plexin B2 protein.
          Length = 1266

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 466 YGRNVDSNTIITLYNITFFRT 528
           YG+N+DS   +TLYN +F R+
Sbjct: 173 YGKNIDSKLHVTLYNCSFGRS 193


>BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein.
          Length = 1838

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 466 YGRNVDSNTIITLYNITFFRT 528
           YG+N+DS   +TLYN +F R+
Sbjct: 745 YGKNIDSKLHVTLYNCSFGRS 765


>AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein.
          Length = 1841

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 466 YGRNVDSNTIITLYNITFFRT 528
           YG+N+DS   +TLYN +F R+
Sbjct: 748 YGKNIDSKLHVTLYNCSFGRS 768


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,926,023
Number of Sequences: 237096
Number of extensions: 1694143
Number of successful extensions: 10664
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10664
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)