Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0938
         (340 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.28 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   6.0  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    20   8.0  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.28
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 101 FFSLGNYEIVPEDIVNSTSTQTFRIN 24
           FF+ G YE+  ++I N  S ++FR+N
Sbjct: 92  FFNQG-YELSKQEIFNCCSKKSFRMN 116


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 281 VTIISVGHNRVGYSRIIIFKQSNHR 207
           +T+ + G+NR+G  RI +  Q + R
Sbjct: 486 ITVNNSGNNRMGTCRIFLAPQFDER 510


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 141 CDNKFEFLILSYRLDLNHNCSHTVV*LFENYDSAVT 248
           CD  +EF I ++ + L  +     V L E  ++  T
Sbjct: 569 CDLMYEFQIFTFLMSLLQSIKRRYVLLNEKVEAIKT 604


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -2

Query: 339 IDYKLPRLKYICVDD 295
           ++Y+L  L ++C++D
Sbjct: 109 VNYRLGMLGFLCLED 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,627
Number of Sequences: 336
Number of extensions: 1474
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)