Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0938
         (340 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   0.45 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           22   5.5  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    21   9.6  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 183 DLNHNCSHTVV*LFENYDSAVTYTIMSNANYSDGXENYHLHKCISIGEVCS 335
           D +H C +  +   + YD+A T+T +SN   S   + +   +   IG  CS
Sbjct: 700 DDHHECRNLKLFEGDPYDNATTFTCVSNCPASHPYKRFP-QEAGKIGPYCS 749


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 240  QNHNFQTIKPPYGSNCD 190
            Q+H++ TI P    NCD
Sbjct: 1253 QHHSYATIGPNCPRNCD 1269


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 247 PTRLCPTLIIVTARKTIIYT 306
           PT    T  I+  RKT+ YT
Sbjct: 217 PTETDITFYIIIRRKTLFYT 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,352
Number of Sequences: 2352
Number of extensions: 6064
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)