Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0938
(340 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 1.0
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 1.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 2.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 2.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 2.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 3.1
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 5.4
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 5.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 5.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 5.4
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 20 7.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 7.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 7.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 7.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 7.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 20 7.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 20 7.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 20 7.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 7.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 20 7.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 20 7.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 7.1
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 20 9.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 20 9.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 9.4
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 20 9.4
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.0 bits (47), Expect = 1.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 110 EIRFFSLGNYEIVPEDIVNSTSTQTFRI 27
E + GNYE I N+T+ Q F++
Sbjct: 218 ECKMEQQGNYENAVSHICNATNKQLFQL 245
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.0 bits (47), Expect = 1.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 110 EIRFFSLGNYEIVPEDIVNSTSTQTFRI 27
E + GNYE I N+T+ Q F++
Sbjct: 218 ECKMEQQGNYENAVSHICNATNKQLFQL 245
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 339 IDYKLPRLKYICVDDSFP 286
I ++PRL+YI SFP
Sbjct: 368 IQEQIPRLRYIGPPTSFP 385
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 2.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 188 KSQLLPYGGLIV*KL*FCCNLHDY 259
K LLP G L+V L F +H Y
Sbjct: 184 KFHLLPTGELLVHSLEFSDQIHGY 207
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 2.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 188 KSQLLPYGGLIV*KL*FCCNLHDY 259
K LLP G L+V L F +H Y
Sbjct: 184 KFHLLPTGELLVHSLEFSDQIHGY 207
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 3.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 247 PTRLCPTLIIVTARKTIIYT 306
PT T I+ RKT+ YT
Sbjct: 218 PTETDITFYIIIRRKTLFYT 237
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = +3
Query: 15 FSYIYSKCLSGRRVNYIFW 71
F ++++ L VNY +W
Sbjct: 312 FVFVFAALLEYAAVNYTYW 330
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 252 TIMSNANYSDGXENYHLH 305
++ +N NY++ NY+ H
Sbjct: 87 SLSNNYNYNNNYNNYNKH 104
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 252 TIMSNANYSDGXENYHLH 305
++ +N NY++ NY+ H
Sbjct: 87 SLSNNYNYNNNYNNYNKH 104
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 252 TIMSNANYSDGXENYHLH 305
++ +N NY++ NY+ H
Sbjct: 87 SLSNNYNYNNNYNNYNKH 104
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 252 TIMSNANYSDGXENYHLH 305
++ +N NY++ NY+ H
Sbjct: 87 SLSNNYNYNNNYNNYNKH 104
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 252 TIMSNANYSDGXENYHLH 305
++ +N NY++ NY+ H
Sbjct: 87 SLSNNYNYNNNYNNYNKH 104
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 252 TIMSNANYSDGXENYHLH 305
++ +N NY++ NY+ H
Sbjct: 87 SLSNNYNYNNNYNNYNKH 104
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 252 TIMSNANYSDGXENYHLH 305
++ +N NY++ NY+ H
Sbjct: 87 SLSNNYNYNNNYNNYNKH 104
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 252 TIMSNANYSDGXENYHLH 305
++ +N NY++ NY+ H
Sbjct: 87 SLSNNYNYNNNYNNYNKH 104
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 252 TIMSNANYSDGXENYHLH 305
++ +N NY++ NY+ H
Sbjct: 320 SLSNNYNYNNNYNNYNKH 337
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 252 TIMSNANYSDGXENYHLH 305
++ +N NY++ NY+ H
Sbjct: 320 SLSNNYNYNNNYNNYNKH 337
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 20.2 bits (40), Expect = 7.1
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -3
Query: 86 NYEIVPEDIVNS 51
N E++PE++VN+
Sbjct: 696 NVEVLPENLVNA 707
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.2 bits (40), Expect = 7.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 164 NLIISIRFKSQLLP 205
NL++S R+ +LLP
Sbjct: 67 NLLLSTRYDKRLLP 80
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.2 bits (40), Expect = 7.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 164 NLIISIRFKSQLLP 205
NL++S R+ +LLP
Sbjct: 67 NLLLSTRYDKRLLP 80
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.2 bits (40), Expect = 7.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 164 NLIISIRFKSQLLP 205
NL++S R+ +LLP
Sbjct: 67 NLLLSTRYDKRLLP 80
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.2 bits (40), Expect = 7.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 164 NLIISIRFKSQLLP 205
NL++S R+ +LLP
Sbjct: 67 NLLLSTRYDKRLLP 80
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.1
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 255 IMSNANYSDGXENYHLH 305
+ +N NY++ NY+ H
Sbjct: 88 LSNNYNYNNNYNNYNKH 104
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 20.2 bits (40), Expect = 7.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 98 FSLGNYEIVPEDIVNSTS 45
+ LGNY +VP + T+
Sbjct: 371 YFLGNYSLVPTTTASPTT 388
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 339 IDYKLPRLKYICVDDSFP 286
I ++PR +YI SFP
Sbjct: 368 IQEQIPRFRYIGPPTSFP 385
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 339 IDYKLPRLKYICVDDSFP 286
I ++PR +YI SFP
Sbjct: 368 IQEQIPRFRYIGPPTSFP 385
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 339 IDYKLPRLKYICVDDSFP 286
I ++PR +YI SFP
Sbjct: 368 IQEQIPRFRYIGPPTSFP 385
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 339 IDYKLPRLKYICVDDSFP 286
I ++PR +YI SFP
Sbjct: 357 IQEQIPRFRYIGPPTSFP 374
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.2 bits (40), Expect = 7.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 12 NFSYIYSKCLSGRRVNYIFWNNFI 83
NF+Y + G+ NYI NN +
Sbjct: 475 NFTYSLALSPDGQFGNYIIKNNSV 498
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 73 TIS*FPKEKNLIS*KISNIHRCNV 144
T+ FP N+ S KI +C++
Sbjct: 382 TVHSFPSTLNIPSVKIDEDQKCSI 405
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 19.8 bits (39), Expect = 9.4
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -3
Query: 92 LGNYEIVPEDIVNSTSTQTFRINI 21
L NY + ++N+T T T ++ +
Sbjct: 42 LSNYNRLIRPVMNNTETLTVQLGL 65
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.8 bits (39), Expect = 9.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 246 LQQNHNFQTIKPPYGS 199
LQ NH +TI+P + +
Sbjct: 110 LQINHEDETIRPVFST 125
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 19.8 bits (39), Expect = 9.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 246 LQQNHNFQTIKPPYGSNCDLNL 181
L ++ N +PP G N +L+L
Sbjct: 235 LFESANISLDEPPLGKNLNLSL 256
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,556
Number of Sequences: 438
Number of extensions: 2167
Number of successful extensions: 33
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7715466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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