BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0937
(291 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 0.44
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 1.3
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 1.8
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 21 2.3
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 21 3.1
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 3.1
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 3.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 3.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 4.1
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 20 5.4
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 20 7.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 7.1
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 19 9.4
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 19 9.4
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 9.4
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 19 9.4
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 19 9.4
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 19 9.4
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 23.8 bits (49), Expect = 0.44
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = -1
Query: 279 RTGATSPRNPSPEFSRSAESIRXPPQMRCSSRSEPYLPSIGFHGTRTLRQ 130
RTG T+ NP S A + P + P +G R +RQ
Sbjct: 382 RTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQ 431
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 1.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 114 PDLSAASSGHFGLPRRTLVFK 52
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 1.8
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 183 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 100
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.4 bits (43), Expect = 2.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AES P R
Sbjct: 81 PRPPHPRLRREAESEAEPGNNR 102
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 53 PRPPHPRLRREAEPKAEPGNNR 74
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.0 bits (42), Expect = 3.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMRCSSRSEPYLP 166
PR P P R AE P R S+P P
Sbjct: 80 PRPPHPRLRREAELEAEPGNNRPVYISQPRPP 111
Score = 21.0 bits (42), Expect = 3.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMRCSSRSEPYLP 166
PR P P R AE P R S+P P
Sbjct: 136 PRPPHPRLRREAELEAEPGNNRPVYISQPRPP 167
Score = 19.8 bits (39), Expect = 7.1
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -1
Query: 267 TSPRNPSPEFSRSAESIRXPPQMR 196
+ PR P P R AE P R
Sbjct: 106 SQPRPPHPRLRREAEPEAEPGNNR 129
Score = 19.8 bits (39), Expect = 7.1
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -1
Query: 267 TSPRNPSPEFSRSAESIRXPPQMR 196
+ PR P P R AE P R
Sbjct: 162 SQPRPPHPRLRREAEPEAEPGNNR 185
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 52 PRPPHPRLRREAEPEAEPGNNR 73
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 192 PRPPHPRLRREAEPEAEPGNNR 213
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 220 PRPPHPRLRREAEPEAEPGNNR 241
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 3.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 160 RIPWNSNAQAEKKTLPGPLG 101
+IPW+ N +A K G G
Sbjct: 334 QIPWDKNVEALAKWANGQTG 353
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.0 bits (42), Expect = 3.1
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = -1
Query: 270 ATSPRNPSPEFSRSAESIRXPPQMRCSSRSEPYLPSIGFH 151
++S SP S + +R CS + P+ + FH
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSPHQKKLRFH 363
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 3.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 69 DGVTQSGLKTPPRGPG 116
DG L +PPR PG
Sbjct: 128 DGPPSVSLSSPPREPG 143
Score = 20.6 bits (41), Expect = 4.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 62 SFLKTRERLLKRFRCRVPE 6
S LKT ++L + C VPE
Sbjct: 107 SLLKTADQLKIKGLCEVPE 125
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.6 bits (41), Expect = 4.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 96 TPPRGPGRV 122
+PPRGPG V
Sbjct: 397 SPPRGPGGV 405
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 20.2 bits (40), Expect = 5.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 210 VSGYSLRTLKIQVRDYVEMSR 272
V+ ++ LKIQ+RD E+ +
Sbjct: 14 VNAMTIEELKIQLRDVQEICK 34
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 19.8 bits (39), Expect = 7.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 65 VRRGNPKWPEDAAERSGK 118
VRR +P W + E+ K
Sbjct: 169 VRREHPFWDDQRVEQEAK 186
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 19.8 bits (39), Expect = 7.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 264 SPRNPSPEFSRSAES 220
SP++ S SRSAES
Sbjct: 444 SPQSDSSSSSRSAES 458
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 53 PRPPHPRLRREAEPEAEPGNNR 74
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 81 PRPPHPRLRREAEPEAEPGNNR 102
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 109 PRPPHPRLRREAEPEAEPGNNR 130
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 19.4 bits (38), Expect = 9.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 118 LPGPLGGVFRPL 83
+PG LGG+F L
Sbjct: 337 MPGILGGIFGAL 348
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.4 bits (38), Expect = 9.4
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 207 PQMRCSSRSEPYLPSIGFH 151
P C + YLPS G H
Sbjct: 230 PTFLCKGDGKWYLPSGGCH 248
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 24 PRPPHPRLRREAEPEAEPGNNR 45
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 52 PRPPHPRLRREAEPEAEPGNNR 73
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 80 PRPPHPRLRREAEPEAEPGNNR 101
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 108 PRPPHPRLRREAEPEAEPGNNR 129
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 261 PRNPSPEFSRSAESIRXPPQMR 196
PR P P R AE P R
Sbjct: 164 PRPPHPRLRREAEPEAEPGNNR 185
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 162 IGFHGTRTLRQKRKLFPDLSAASSGHFG 79
+GFHG R R ++ S+ FG
Sbjct: 257 MGFHGMRGKRDAAGIYGSNSSTVGTIFG 284
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 162 IGFHGTRTLRQKRKLFPDLSAASSGHFG 79
+GFHG R R ++ S+ FG
Sbjct: 257 MGFHGMRGKRDAAGIYGSNSSTVGTIFG 284
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,731
Number of Sequences: 438
Number of extensions: 2084
Number of successful extensions: 32
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5869407
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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