SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0933
         (494 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF120981-1|ABO93159.1|  637|Drosophila melanogaster misfire prot...    28   8.0  
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot...    28   8.0  
EF120978-1|ABO93156.1|  839|Drosophila melanogaster misfire prot...    28   8.0  
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot...    28   8.0  
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot...    28   8.0  
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA...    28   8.0  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    28   8.0  

>EF120981-1|ABO93159.1|  637|Drosophila melanogaster misfire
           protein.
          Length = 637

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
           AG +    NPLR +QRL   +  P KW+ + R
Sbjct: 471 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 502


>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
           protein.
          Length = 1396

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
           AG +    NPLR +QRL   +  P KW+ + R
Sbjct: 561 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 592


>EF120978-1|ABO93156.1|  839|Drosophila melanogaster misfire
           protein.
          Length = 839

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
           AG +    NPLR +QRL   +  P KW+ + R
Sbjct: 22  AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 53


>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
           protein.
          Length = 1437

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
           AG +    NPLR +QRL   +  P KW+ + R
Sbjct: 561 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 592


>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
           protein.
          Length = 1659

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
           AG +    NPLR +QRL   +  P KW+ + R
Sbjct: 783 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 814


>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
           protein.
          Length = 1782

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
           AG +    NPLR +QRL   +  P KW+ + R
Sbjct: 745 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 776


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +3

Query: 90   RLTREXLLFTRNPSPRQSSRASLEYLLLPPXSAPTEAPSGLTPR 221
            RLT E    T  P P  S R +LE  +    +  T+  SG TPR
Sbjct: 8019 RLTSEESTETTRPVPTVSPRDALETTVTSLITETTKTTSGGTPR 8062


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,673,043
Number of Sequences: 53049
Number of extensions: 484429
Number of successful extensions: 1284
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -