BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0933
(494 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF120981-1|ABO93159.1| 637|Drosophila melanogaster misfire prot... 28 8.0
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot... 28 8.0
EF120978-1|ABO93156.1| 839|Drosophila melanogaster misfire prot... 28 8.0
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot... 28 8.0
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot... 28 8.0
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA... 28 8.0
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 28 8.0
>EF120981-1|ABO93159.1| 637|Drosophila melanogaster misfire
protein.
Length = 637
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
AG + NPLR +QRL + P KW+ + R
Sbjct: 471 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 502
>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
protein.
Length = 1396
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
AG + NPLR +QRL + P KW+ + R
Sbjct: 561 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 592
>EF120978-1|ABO93156.1| 839|Drosophila melanogaster misfire
protein.
Length = 839
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
AG + NPLR +QRL + P KW+ + R
Sbjct: 22 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 53
>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
protein.
Length = 1437
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
AG + NPLR +QRL + P KW+ + R
Sbjct: 561 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 592
>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
protein.
Length = 1659
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
AG + NPLR +QRL + P KW+ + R
Sbjct: 783 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 814
>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
protein.
Length = 1782
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 420 AGRWPWKSNPLRSVQRLTCRSNQP*KWMALKR 325
AG + NPLR +QRL + P KW+ + R
Sbjct: 745 AGVFGCSKNPLRKLQRLKYLTPPPLKWVPIAR 776
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +3
Query: 90 RLTREXLLFTRNPSPRQSSRASLEYLLLPPXSAPTEAPSGLTPR 221
RLT E T P P S R +LE + + T+ SG TPR
Sbjct: 8019 RLTSEESTETTRPVPTVSPRDALETTVTSLITETTKTTSGGTPR 8062
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,673,043
Number of Sequences: 53049
Number of extensions: 484429
Number of successful extensions: 1284
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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