Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0840
(1002 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 98 1e-21
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 98 2e-21
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 98 2e-21
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 59 1e-09
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 52 1e-07
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 50 7e-07
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 34 0.027
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 34 0.027
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 32 0.15
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 29 1.0
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 29 1.4
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 28 1.8
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 1.8
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 28 1.8
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 28 2.4
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 4.1
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi... 26 7.2
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 7.2
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 26 7.2
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 98.3 bits (234), Expect = 1e-21
Identities = 56/105 (53%), Positives = 64/105 (60%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKES 684
+ NKMD+T +S+ RFEEI KE+
Sbjct: 130 DGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKET 172
Score = 77.8 bits (183), Expect = 2e-15
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Score = 74.9 bits (176), Expect = 2e-14
Identities = 49/99 (49%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = +3
Query: 516 GTGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT 695
GTGEFEAGISK+GQTREHALLA+TLGVKQLI N T A+ E T
Sbjct: 119 GTGEFEAGISKDGQTREHALLAYTLGVKQLI--VAVNKMDTTGWSQARF----EEIVKET 172
Query: 696 SRRLATTQLLSLSCPF---SGWHGDTCWEPSTKMPWVQG 803
S + + PF SG+ GD EP+T MPW QG
Sbjct: 173 SNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQG 211
Score = 64.1 bits (149), Expect = 3e-11
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 254
MGKEK HIN+VVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYK 30
Score = 33.1 bits (72), Expect = 0.063
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++ S++IKK+G+NP V FVP+
Sbjct: 170 KETSNFIKKVGFNPKTVPFVPV 191
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 97.9 bits (233), Expect = 2e-21
Identities = 55/105 (52%), Positives = 64/105 (60%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI + +
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKES 684
+ NKMD+T +S+ RFEEI KE+
Sbjct: 130 DGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKET 172
Score = 77.8 bits (183), Expect = 2e-15
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Score = 74.9 bits (176), Expect = 2e-14
Identities = 49/99 (49%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = +3
Query: 516 GTGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT 695
GTGEFEAGISK+GQTREHALLA+TLGVKQLI N T A+ E T
Sbjct: 119 GTGEFEAGISKDGQTREHALLAYTLGVKQLI--VAVNKMDTTGWSQARF----EEIVKET 172
Query: 696 SRRLATTQLLSLSCPF---SGWHGDTCWEPSTKMPWVQG 803
S + + PF SG+ GD EP+T MPW QG
Sbjct: 173 SNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQG 211
Score = 64.1 bits (149), Expect = 3e-11
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 254
MGKEK HIN+VVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYK 30
Score = 33.1 bits (72), Expect = 0.063
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++ S++IKK+G+NP V FVP+
Sbjct: 170 KETSNFIKKVGFNPKTVPFVPV 191
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 97.9 bits (233), Expect = 2e-21
Identities = 55/105 (52%), Positives = 64/105 (60%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI + +
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKES 684
+ NKMD+T +S+ RFEEI KE+
Sbjct: 130 DGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKET 172
Score = 77.8 bits (183), Expect = 2e-15
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Score = 74.9 bits (176), Expect = 2e-14
Identities = 49/99 (49%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = +3
Query: 516 GTGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT 695
GTGEFEAGISK+GQTREHALLA+TLGVKQLI N T A+ E T
Sbjct: 119 GTGEFEAGISKDGQTREHALLAYTLGVKQLI--VAVNKMDTTGWSQARF----EEIVKET 172
Query: 696 SRRLATTQLLSLSCPF---SGWHGDTCWEPSTKMPWVQG 803
S + + PF SG+ GD EP+T MPW QG
Sbjct: 173 SNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQG 211
Score = 64.1 bits (149), Expect = 3e-11
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 254
MGKEK HIN+VVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYK 30
Score = 33.1 bits (72), Expect = 0.063
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++ S++IKK+G+NP V FVP+
Sbjct: 170 KETSNFIKKVGFNPKTVPFVPV 191
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 58.8 bits (136), Expect = 1e-09
Identities = 38/102 (37%), Positives = 48/102 (47%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
G+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+ N + L
Sbjct: 240 GVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLE 299
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIK 675
+ NK+D +SE RF+EIK
Sbjct: 300 NGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIK 339
Score = 43.6 bits (98), Expect = 4e-05
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 364
G I+ R+++K EA GKGSF YAW+LD + ER
Sbjct: 202 GEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEER 237
Score = 33.9 bits (74), Expect = 0.036
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3
Query: 177 KTHINIVVIGHVDSGKSTTTGHLIYKV 257
K +++VV GHVDSGKST G +++++
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFEL 201
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 52.4 bits (120), Expect = 1e-07
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Frame = +3
Query: 177 KTHINIVVIGHVDSGKSTTTGHLIYKVVVLTNVXXXXXXXXXXKWVKDPSNMLGYWTN*R 356
K H+NIV IGHVD+GKST G+ ++ LT + + K+ Y +
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGN----ILFLTGMVDKRTMEKIEREAKEAGKESWYLSWAL 291
Query: 357 LSVXXYHNRYCSLEVRN*QVLCYHH*CSWTQR-FHQEHDHRNLSG*LRCAHR----AAGT 521
S + ++EV H S H+ + ++G + +A
Sbjct: 292 DSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARR 351
Query: 522 GEFEAGISKNGQTREHALLAFTLGVKQLI 608
GEFEAG + GQTREHA+LA T G+ L+
Sbjct: 352 GEFEAGFERGGQTREHAVLARTQGINHLV 380
Score = 48.8 bits (111), Expect = 1e-06
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+
Sbjct: 301 GKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLV 346
Score = 46.8 bits (106), Expect = 5e-06
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +2
Query: 254 SGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
+G +DKRT+EK E+EA+E GK S+ +W LD ERE
Sbjct: 262 TGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEERE 299
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 49.6 bits (113), Expect = 7e-07
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GITI A ++ET+ + +D PGH D+IKNMITG + D A+++
Sbjct: 101 GITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIV 146
Score = 33.5 bits (73), Expect = 0.048
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 171 KEKTHINIVVIGHVDSGKSTTT 236
++K H+NI IGHVD GK+T T
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLT 70
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 555 QTREHALLAFTLGVKQLI 608
QTREH LLA +GVKQ++
Sbjct: 156 QTREHLLLARQVGVKQIV 173
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 34.3 bits (75), Expect = 0.027
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKVVVLT 269
MGK N+ VI HVD GKST T L+ K +++
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIIS 47
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 415 YYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
+ V +ID+PGH DF + D A+++
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVV 128
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 34.3 bits (75), Expect = 0.027
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKVVVLT 269
MGK N+ VI HVD GKST T L+ K +++
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIIS 47
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 415 YYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
+ V +ID+PGH DF + D A+++
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVV 128
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 31.9 bits (69), Expect = 0.15
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GITI+ A F + +ID PGH DF + + D AV I
Sbjct: 78 GITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAI 123
Score = 28.3 bits (60), Expect = 1.8
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 189 NIVVIGHVDSGKSTTTGHLIY 251
N+ +I H+D+GK+T T ++Y
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLY 50
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 370 GITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GIT I + F+ ++T +D PGH F G + AD VL+
Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLV 250
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 400 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
FE S Y + IID PGH DF + D AVL+
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLV 175
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 189 NIVVIGHVDSGKSTTTGHLIY 251
NI + H+DSGK+T T ++Y
Sbjct: 61 NIGISAHIDSGKTTFTERVLY 81
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 418 YVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
+V+ +D PGH + M+ G + D A+L+
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLL 138
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 427 IIDAPGHRDFIKNMITGTSQADCAVLI 507
IID PGH F GTS + A+L+
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILV 579
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 415 YYVTIIDAPGHRDFIKNMITGTSQADCA-VLIELPVPVNSKLVSL 546
Y + +ID+PGH DF + + + D A VL++ V S+ +++
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITV 138
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/52 (21%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 391 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD-CAVLIELPVPVNSKLVS 543
++ + Y + +ID PGH DF ++ + + C +L++ + ++ +S
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQGIQAQTLS 167
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -2
Query: 692 MRILSFLISSNLGSLYGGSVESI 624
+R++ +I S+LGSL GG+V S+
Sbjct: 389 IRLIPMIIGSSLGSLLGGAVISL 411
>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 749
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 682 FPS*FPQIWAHCMVVQWNPFCLLLRMSCLTPRVKASKACSRV*PFL 545
F + FP I A + P C+ M CL ++ + + S++ PF+
Sbjct: 400 FTAIFPIISAANSYPERVPLCIFQYMDCLKSKLPSGEFLSKIVPFI 445
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 373 ITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 465
+ I+I + E +++ T+ID PG DFI N
Sbjct: 71 VEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 7.2
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = -1
Query: 510 LDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTXSRSAFSLSNTQA 331
L EH+A+ L S +L IS R N GNI L S + + S + L+ + A
Sbjct: 3 LYEHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDA 59
Query: 330 YLKDPLPI 307
K LPI
Sbjct: 60 LPKALLPI 67
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,059,228
Number of Sequences: 5004
Number of extensions: 81609
Number of successful extensions: 286
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 519268360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -