Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0840
(1002 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 109 4e-24
03_01_0547 + 4093196-4093657,4094267-4095148 109 4e-24
03_01_0544 + 4082528-4082989,4083585-4084466 109 4e-24
03_01_0543 + 4076981-4077442,4078145-4079026 109 4e-24
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 61 2e-09
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 61 2e-09
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 60 2e-09
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 54 2e-07
02_04_0462 + 23131433-23132836 53 3e-07
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 52 5e-07
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 46 5e-05
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 36 0.067
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 32 0.83
08_02_1046 - 23919990-23920183,23920251-23920479,23920624-239210... 30 3.3
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 29 4.4
04_01_0103 + 1082077-1082167,1083037-1085477 29 4.4
02_04_0017 + 18937774-18937864,18938505-18940945 29 4.4
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 29 5.8
01_06_0662 + 30987187-30987277,30987825-30990214 29 7.7
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 7.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 109 bits (261), Expect = 4e-24
Identities = 56/104 (53%), Positives = 65/104 (62%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMD+T P YS+ R++EI KE
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 173
Score = 70.1 bits (164), Expect = 3e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKV 257
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK+
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 60.9 bits (141), Expect = 2e-09
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 519 TGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT- 695
TG FEAGISK+GQTREHALLAFTLGVKQ+I N TT + ++ ++ K +
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMI--CCCNKMDATTPKYSKARYDEIVKEVSSY 177
Query: 696 SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+++ P SG+ GD E ST + W +G
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 37.5 bits (83), Expect = 0.017
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++VSSY+KK+GYNP + FVPI
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPI 193
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 109 bits (261), Expect = 4e-24
Identities = 56/104 (53%), Positives = 65/104 (62%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMD+T P YS+ R++EI KE
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 173
Score = 70.1 bits (164), Expect = 3e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKV 257
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK+
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 60.9 bits (141), Expect = 2e-09
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 519 TGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT- 695
TG FEAGISK+GQTREHALLAFTLGVKQ+I N TT + ++ ++ K +
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMI--CCCNKMDATTPKYSKARYDEIVKEVSSY 177
Query: 696 SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+++ P SG+ GD E ST + W +G
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 37.5 bits (83), Expect = 0.017
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++VSSY+KK+GYNP + FVPI
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPI 193
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 109 bits (261), Expect = 4e-24
Identities = 56/104 (53%), Positives = 65/104 (62%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMD+T P YS+ R++EI KE
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 173
Score = 70.1 bits (164), Expect = 3e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKV 257
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK+
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 60.9 bits (141), Expect = 2e-09
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 519 TGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT- 695
TG FEAGISK+GQTREHALLAFTLGVKQ+I N TT + ++ ++ K +
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMI--CCCNKMDATTPKYSKARYDEIVKEVSSY 177
Query: 696 SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+++ P SG+ GD E ST + W +G
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 37.5 bits (83), Expect = 0.017
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++VSSY+KK+GYNP + FVPI
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPI 193
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 109 bits (261), Expect = 4e-24
Identities = 56/104 (53%), Positives = 65/104 (62%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMD+T P YS+ R++EI KE
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKE 173
Score = 70.1 bits (164), Expect = 3e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKV 257
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK+
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 60.9 bits (141), Expect = 2e-09
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 519 TGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT- 695
TG FEAGISK+GQTREHALLAFTLGVKQ+I N TT + ++ ++ K +
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMI--CCCNKMDATTPKYSKARYDEIVKEVSSY 177
Query: 696 SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+++ P SG+ GD E ST + W +G
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 37.5 bits (83), Expect = 0.017
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++VSSY+KK+GYNP + FVPI
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPI 193
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 60.9 bits (141), Expect = 2e-09
Identities = 23/46 (50%), Positives = 36/46 (78%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
G+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+
Sbjct: 310 GVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILV 355
Score = 48.4 bits (110), Expect = 9e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
G I K+ + K EKEA+E GKGSF YAW +D+ ERE
Sbjct: 272 GRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Score = 35.9 bits (79), Expect = 0.051
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 180 THINIVVIGHVDSGKSTTTGHLIY 251
+ +N+ ++GHVDSGKST +G L++
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLH 269
Score = 32.7 bits (71), Expect = 0.47
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 513 AGTGEFEAGISKNG-----QTREHALLAFTLGVKQLI 608
A TG FEAG+ G QT+EHA L + GV+QLI
Sbjct: 358 ACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLI 394
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 60.9 bits (141), Expect = 2e-09
Identities = 23/46 (50%), Positives = 36/46 (78%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
G+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+
Sbjct: 310 GVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILV 355
Score = 48.4 bits (110), Expect = 9e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
G I K+ + K EKEA+E GKGSF YAW +D+ ERE
Sbjct: 272 GRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Score = 35.9 bits (79), Expect = 0.051
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 180 THINIVVIGHVDSGKSTTTGHLIY 251
+ +N+ ++GHVDSGKST +G L++
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLH 269
Score = 32.7 bits (71), Expect = 0.47
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 513 AGTGEFEAGISKNG-----QTREHALLAFTLGVKQLI 608
A TG FEAG+ G QT+EHA L + GV+QLI
Sbjct: 358 ACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLI 394
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 60.5 bits (140), Expect = 2e-09
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL-IELPVPVNSKLVSL 546
GIT+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L I+ + + +
Sbjct: 297 GITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGI 356
Query: 547 RTV-KXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ + NKMDS E YS+ RF IK +
Sbjct: 357 NGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVE--YSKERFNFIKSQ 400
Score = 32.3 bits (70), Expect = 0.62
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 513 AGTGEFEAGISKNG--QTREHALLAFTLGVKQLI 608
A G FEAG+ NG QT+EH+ L + GV LI
Sbjct: 345 ASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLI 378
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 308 MGKGSFKYAWVLDKLKAERE 367
+GKGSF YAW +D+ ERE
Sbjct: 276 IGKGSFAYAWAMDESADERE 295
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+ + R
Sbjct: 16 GKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYER 75
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKESI 687
+ NKMD + +S+ R++EI+ + +
Sbjct: 76 GGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMV 121
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +3
Query: 510 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 608
+A GEFE G + GQTREH LLA TLGV +L+
Sbjct: 63 SARKGEFETGYERGGQTREHVLLAKTLGVSKLV 95
>02_04_0462 + 23131433-23132836
Length = 467
Score = 53.2 bits (122), Expect = 3e-07
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+
Sbjct: 118 GITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILV 163
Score = 34.7 bits (76), Expect = 0.12
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 162 KMGKEKTHINIVVIGHVDSGKSTTTGHL 245
K + K H+NI IGHVD GK+T T L
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAAL 90
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 52.4 bits (120), Expect = 5e-07
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILV 160
Score = 32.3 bits (70), Expect = 0.62
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 171 KEKTHINIVVIGHVDSGKSTTT 236
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLT 84
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 46.0 bits (104), Expect = 5e-05
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIELPVPVNSKL 537
G T+++ FET TI+DAP GH+ ++ NMI+G SQAD VL+ +
Sbjct: 57 GKTVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFET 116
Query: 538 VSLRTVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKESI 687
+ + NKMD +S+ R++EI+ + +
Sbjct: 117 GYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMV 166
Score = 46.0 bits (104), Expect = 5e-05
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 510 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 608
+A GEFE G K GQTREH LLA TLGV +LI
Sbjct: 108 SARKGEFETGYEKGGQTREHVLLAKTLGVAKLI 140
Score = 38.7 bits (86), Expect = 0.007
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +2
Query: 254 SGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 364
SG +D RTI+K+EKEA++ + S+ A+++D + ER
Sbjct: 18 SGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 54
>01_01_0832 -
6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 35.5 bits (78), Expect = 0.067
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = -1
Query: 540 YQLRIHRYRQLDEHSAISLRGSCDHVLDE-ISVSRSINDGNIVLASFELPESNIDCDTXS 364
Y+L+ +R+RQ E + ++ RG C+ +DE S+ +S+ND ++ E SN D + S
Sbjct: 271 YKLKANRFRQAIEEAFLAERGFCELEMDEGCSLEKSVNDQSVPDGLQEGSGSNNDQECQS 330
Query: 363 RS 358
+
Sbjct: 331 EA 332
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 31.9 bits (69), Expect = 0.83
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GITI A + Y V IID PGH DF + D A+L+
Sbjct: 121 GITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILV 166
>08_02_1046 -
23919990-23920183,23920251-23920479,23920624-23921057,
23921426-23921567,23922163-23922255,23923132-23923245,
23924181-23924266,23924458-23924506,23924717-23924783,
23925550-23925665,23925698-23925821,23926465-23926553,
23926810-23927061
Length = 662
Score = 29.9 bits (64), Expect = 3.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 640 PPYSEPRFEEIKKESILIHQEDW 708
PP P FEE KE ++ +E+W
Sbjct: 72 PPLENPAFEEYYKEQRIVREEEW 94
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +3
Query: 183 HINIVVIGHVDSGKSTTTGHLIY 251
HI+ V++ H+D+GK+TTT ++Y
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLY 126
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLI 248
M K+ N+ VI HVD GKST T L+
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLV 40
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLI 248
M K+ N+ VI HVD GKST T L+
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLV 40
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLI 248
M K+ N+ VI HVD GKST T L+
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLV 40
Score = 28.7 bits (61), Expect = 7.7
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 382 DIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
D AL FE + Y + +ID+PGH DF + D A+++
Sbjct: 83 DAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVV 128
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLI 248
M K+ N+ V+ HVD GKST T L+
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLV 40
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 427 IIDAPGHRDFIKNMITGTSQADCAVLI 507
+ID PGH+ F G+S D A+L+
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILV 515
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,975,239
Number of Sequences: 37544
Number of extensions: 585460
Number of successful extensions: 1594
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2940399740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -