Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0840
(1002 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 127 2e-31
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 127 2e-31
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 122 7e-30
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 119 4e-29
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 27 0.35
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.9
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 24 1.9
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 24 2.5
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.3
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 127 bits (306), Expect = 2e-31
Identities = 66/104 (63%), Positives = 69/104 (66%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 13 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 72
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMDSTEPPYSE RFEEIKKE
Sbjct: 73 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKE 116
Score = 85.0 bits (201), Expect = 9e-19
Identities = 50/99 (50%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +3
Query: 510 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYP 689
AAGTGEFEAGISKNGQTREHALLAFTLGVKQLI N T ++ + K
Sbjct: 60 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLI--VGVNKMDSTEPPYSETRFEEIKKEV 117
Query: 690 HT-SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+ +++ P SGWHGD E S+KMPW +G
Sbjct: 118 SSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKG 156
Score = 48.4 bits (110), Expect = 1e-07
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +2
Query: 674 RRKVSSYIKKIGYNPAAVAFVPIFWMARRHMLGAFNQNALGSRGGQVXRKGRAKLDGK 847
+++VSSYIKKIGYNPAAVAFVPI +ML + +G V RK K++GK
Sbjct: 114 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EVSSKMPWFKGWTVERK-EGKVEGK 169
Score = 27.5 bits (58), Expect = 0.20
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 335 WVLDKLKAERE 367
WVLDKLKAERE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 127 bits (306), Expect = 2e-31
Identities = 66/104 (63%), Positives = 69/104 (66%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMDSTEPPYSE RFEEIKKE
Sbjct: 130 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKE 173
Score = 85.0 bits (201), Expect = 9e-19
Identities = 50/99 (50%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +3
Query: 510 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYP 689
AAGTGEFEAGISKNGQTREHALLAFTLGVKQLI N T ++ + K
Sbjct: 117 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLI--VGVNKMDSTEPPYSETRFEEIKKEV 174
Query: 690 HT-SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+ +++ P SGWHGD E S+KMPW +G
Sbjct: 175 SSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKG 213
Score = 81.4 bits (192), Expect = 1e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 64.9 bits (151), Expect = 1e-12
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYK 30
Score = 48.4 bits (110), Expect = 1e-07
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +2
Query: 674 RRKVSSYIKKIGYNPAAVAFVPIFWMARRHMLGAFNQNALGSRGGQVXRKGRAKLDGK 847
+++VSSYIKKIGYNPAAVAFVPI +ML + +G V RK K++GK
Sbjct: 171 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EVSSKMPWFKGWTVERK-EGKVEGK 226
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 122 bits (293), Expect = 7e-30
Identities = 63/104 (60%), Positives = 68/104 (65%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMD T+PPYSE RFEEIKKE
Sbjct: 130 NGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKE 173
Score = 85.0 bits (201), Expect = 9e-19
Identities = 50/100 (50%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Frame = +3
Query: 510 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYP 689
AAG GEFEAGISKNGQTREHALLAFTLGVKQLI + A+ +E K
Sbjct: 117 AAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARF---EEIKKE 173
Query: 690 HTS--RRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+S +++ P SGWHGD EPS K PW +G
Sbjct: 174 VSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKG 213
Score = 81.4 bits (192), Expect = 1e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 64.9 bits (151), Expect = 1e-12
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYK 30
Score = 43.2 bits (97), Expect = 4e-06
Identities = 27/61 (44%), Positives = 36/61 (59%)
Frame = +2
Query: 674 RRKVSSYIKKIGYNPAAVAFVPIFWMARRHMLGAFNQNALGSRGGQVXRKGRAKLDGKNX 853
+++VSSYIKKIGYN A+VAFVPI +ML + +G +V RK DGK
Sbjct: 171 KKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEP-SPKTPWYKGWKVERKD-GNADGKTL 228
Query: 854 L 856
+
Sbjct: 229 I 229
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 119 bits (287), Expect = 4e-29
Identities = 62/100 (62%), Positives = 65/100 (65%)
Frame = +1
Query: 382 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLRTVKX 561
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI + + +
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 562 XXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
NKMDSTEPPYSE RFEEIKKE
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKE 100
Score = 85.0 bits (201), Expect = 9e-19
Identities = 50/99 (50%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +3
Query: 510 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYP 689
AAGTGEFEAGISKNGQTREHALLAFTLGVKQLI N T ++ + K
Sbjct: 44 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLI--VGVNKMDSTEPPYSETRFEEIKKEV 101
Query: 690 HT-SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+ +++ P SGWHGD E S+KMPW +G
Sbjct: 102 SSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKG 140
Score = 48.4 bits (110), Expect = 1e-07
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +2
Query: 674 RRKVSSYIKKIGYNPAAVAFVPIFWMARRHMLGAFNQNALGSRGGQVXRKGRAKLDGK 847
+++VSSYIKKIGYNPAAVAFVPI +ML + +G V RK K++GK
Sbjct: 98 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EVSSKMPWFKGWTVERK-EGKVEGK 153
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 26.6 bits (56), Expect = 0.35
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 421 VTIIDAPGHRDFIKNMITGTSQADCAVLI 507
VT +D PGH FI G D VL+
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLV 223
Score = 25.4 bits (53), Expect = 0.81
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 177 KTHINIVVIGHVDSGKST 230
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.9
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 186 INIVVIGHVDSGKST 230
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 24.2 bits (50), Expect = 1.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 810 RWXVREGPSWTGKM 851
RW R+G W GKM
Sbjct: 2 RWINRDGEKWKGKM 15
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.8 bits (49), Expect = 2.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 406 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIE 510
T KYY D P + FIKN+ ++ +D LI+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLID 328
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.4 bits (48), Expect = 3.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 406 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIE 510
T KYY D P + FIKN+ ++ +D L++
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLVD 328
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,770
Number of Sequences: 438
Number of extensions: 6528
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33258225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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