Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0840
(1002 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 108 5e-24
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 108 5e-24
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 108 5e-24
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 108 5e-24
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 58 9e-09
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 54 1e-07
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 54 2e-07
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 52 5e-07
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.91
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 31 0.91
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.91
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 30 2.1
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 30 2.1
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 30 2.8
At5g46550.1 68418.m05731 DNA-binding bromodomain-containing prot... 29 3.7
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 29 6.4
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 28 8.5
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 28 8.5
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 28 8.5
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 108 bits (260), Expect = 5e-24
Identities = 56/104 (53%), Positives = 65/104 (62%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMD+T P YS+ R++EI KE
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 64.9 bits (151), Expect = 8e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKV 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYK+
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 60.5 bits (140), Expect = 2e-09
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 519 TGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT- 695
TG FEAGISK+GQTREHALLAFTLGVKQ+I N TT + ++ ++ K +
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMI--CCCNKMDATTPKYSKARYDEIIKEVSSY 177
Query: 696 SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+++ P SG+ GD E ST + W +G
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 37.5 bits (83), Expect = 0.014
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++VSSY+KK+GYNP + FVPI
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPI 193
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 108 bits (260), Expect = 5e-24
Identities = 56/104 (53%), Positives = 65/104 (62%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMD+T P YS+ R++EI KE
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 64.9 bits (151), Expect = 8e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKV 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYK+
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 60.5 bits (140), Expect = 2e-09
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 519 TGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT- 695
TG FEAGISK+GQTREHALLAFTLGVKQ+I N TT + ++ ++ K +
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMI--CCCNKMDATTPKYSKARYDEIIKEVSSY 177
Query: 696 SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+++ P SG+ GD E ST + W +G
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 37.5 bits (83), Expect = 0.014
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++VSSY+KK+GYNP + FVPI
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPI 193
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 108 bits (260), Expect = 5e-24
Identities = 56/104 (53%), Positives = 65/104 (62%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMD+T P YS+ R++EI KE
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 64.9 bits (151), Expect = 8e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKV 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYK+
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 60.5 bits (140), Expect = 2e-09
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 519 TGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT- 695
TG FEAGISK+GQTREHALLAFTLGVKQ+I N TT + ++ ++ K +
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMI--CCCNKMDATTPKYSKARYDEIIKEVSSY 177
Query: 696 SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+++ P SG+ GD E ST + W +G
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 37.5 bits (83), Expect = 0.014
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++VSSY+KK+GYNP + FVPI
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPI 193
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 108 bits (260), Expect = 5e-24
Identities = 56/104 (53%), Positives = 65/104 (62%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI + +
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKE 681
+ NKMD+T P YS+ R++EI KE
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 32 GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 64.9 bits (151), Expect = 8e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 165 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKV 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYK+
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKL 31
Score = 60.5 bits (140), Expect = 2e-09
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 519 TGEFEAGISKNGQTREHALLAFTLGVKQLIRRSKQNGFH*TTIQ*AQI*GNQEGKYPHT- 695
TG FEAGISK+GQTREHALLAFTLGVKQ+I N TT + ++ ++ K +
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMI--CCCNKMDATTPKYSKARYDEIIKEVSSY 177
Query: 696 SRRLATTQLLSLSCPFSGWHGDTCWEPSTKMPWVQG 803
+++ P SG+ GD E ST + W +G
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 37.5 bits (83), Expect = 0.014
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 677 RKVSSYIKKIGYNPAAVAFVPI 742
++VSSY+KK+GYNP + FVPI
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPI 193
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 58.0 bits (134), Expect = 9e-09
Identities = 21/46 (45%), Positives = 36/46 (78%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L+
Sbjct: 302 GITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILV 347
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 257 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 367
G I ++ + K+EKEA+ GKGSF YAW LD+ ERE
Sbjct: 264 GRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERE 300
Score = 35.9 bits (79), Expect = 0.042
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 180 THINIVVIGHVDSGKSTTTGHLIY 251
+ +N+ ++GHVDSGKST +G L++
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLH 261
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 513 AGTGEFEAGISK-NGQTREHALLAFTLGVKQLI 608
A G FEAG GQTREHA + GV+Q+I
Sbjct: 350 ASVGAFEAGFDNLKGQTREHARVLRGFGVEQVI 382
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIELPVPVNSKLVSLR 549
G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+ + R
Sbjct: 164 GKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYER 223
Query: 550 TVKXXXXXXXXXXXXXXXXXXXXNKMDSTEPPYSEPRFEEIKKESI 687
+ NKMD +S+ R++EI+++ +
Sbjct: 224 GGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMV 269
Score = 42.7 bits (96), Expect = 4e-04
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +3
Query: 510 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 608
+A GEFE G + GQTREH LA TLGV +LI
Sbjct: 211 SARKGEFETGYERGGQTREHVQLAKTLGVSKLI 243
Score = 38.7 bits (86), Expect = 0.006
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +3
Query: 174 EKTHINIVVIGHVDSGKSTTTGHLIY 251
+K H+N+V IGHVD+GKST G +++
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILF 123
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2
Query: 254 SGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 364
SG +D R I+K+EKEA++ + S+ A+++D + ER
Sbjct: 125 SGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNEEER 161
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+
Sbjct: 127 GITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILV 172
Score = 35.5 bits (78), Expect = 0.056
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 162 KMGKEKTHINIVVIGHVDSGKSTTTGHL 245
K ++K H+NI IGHVD GK+T T L
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAAL 99
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 52.4 bits (120), Expect = 5e-07
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILV 160
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 171 KEKTHINIVVIGHVDSGKSTTT 236
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.5 bits (68), Expect = 0.91
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GITI A Y V IID PGH DF + D A+L+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILV 163
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 31.5 bits (68), Expect = 0.91
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 177 KTHINIVVIGHVDSGKSTTTGHLIY 251
K + NI ++ H+D+GK+TTT ++Y
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILY 118
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDF 456
GITI A K+ + IID PGH DF
Sbjct: 146 GITITSAATTTFWDKHRINIIDTPGHVDF 174
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.5 bits (68), Expect = 0.91
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +1
Query: 370 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
GITI A Y V IID PGH DF + D A+L+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILV 163
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 373 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
+ + + L + Y I+D PGH +F M AD AVLI
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLI 239
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 373 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
+ + + L + Y I+D PGH +F M AD AVLI
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLI 239
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 373 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
IT+ + + Y + +ID+PGH DF + T +D A+++
Sbjct: 60 ITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVL 104
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 189 NIVVIGHVDSGKSTTTGHLI 248
NI ++ HVD GK+T HLI
Sbjct: 11 NICILAHVDHGKTTLADHLI 30
>At5g46550.1 68418.m05731 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 494
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 734 RKRQQLGCSQSS*CMRILSFLISSNLGSLYGGSVESI 624
+K+Q+L C SS C+ +L FL+ G L+ V+ +
Sbjct: 60 KKKQRLDCDWSSQCLALLRFLMEHRGGWLFKEPVDPV 96
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 403 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 507
E S Y + +ID PGH DF + S A+L+
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLV 165
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 427 IIDAPGHRDFIKNMITGTSQADCAVLI 507
+ID PGH F G+S D A+L+
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILV 139
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 427 IIDAPGHRDFIKNMITGTSQADCAVLI 507
+ID PGH F G+S D A+L+
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILV 798
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 427 IIDAPGHRDFIKNMITGTSQADCAVLI 507
+ID PGH F G+S D A+L+
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILV 731
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,831,325
Number of Sequences: 28952
Number of extensions: 447515
Number of successful extensions: 1308
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2450812896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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