Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0837
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 201 3e-52
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 201 3e-52
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 201 3e-52
Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2 prot... 193 9e-50
AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical ... 193 9e-50
AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical... 192 3e-49
U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catal... 186 1e-47
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 34 0.086
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 34 0.086
U49830-3|AAV58879.1| 218|Caenorhabditis elegans Hypothetical pr... 29 2.4
U49830-1|AAK31483.1| 458|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 3.2
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 3.2
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81069-4|CAB02991.1| 370|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical pr... 28 5.6
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 201 bits (491), Expect = 3e-52
Identities = 92/147 (62%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
AKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSADT RDPRGFA+K
Sbjct: 72 AKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIK 131
Query: 435 FYTDDGVWDLVGNNTPIFFIRDPT-FSRVLSILRRETLQHI*KIQTCFGTF*P*DQRTIH 611
FYT++G WDLVGNNTPIFFIRDP F + +R H+ K F +H
Sbjct: 132 FYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHL-KDPNMIFDFWLHRPEALH 190
Query: 612 QLLYLFGDRGIPDGYRHMNGYGSHTFQ 692
Q+++LF DRG+PDGYRHMNGYGSHTF+
Sbjct: 191 QVMFLFSDRGLPDGYRHMNGYGSHTFK 217
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 49 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 228
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 229 ERIPERVV 252
ERIPERVV
Sbjct: 63 ERIPERVV 70
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 201 bits (491), Expect = 3e-52
Identities = 92/147 (62%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
AKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSADT RDPRGFA+K
Sbjct: 72 AKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIK 131
Query: 435 FYTDDGVWDLVGNNTPIFFIRDPT-FSRVLSILRRETLQHI*KIQTCFGTF*P*DQRTIH 611
FYT++G WDLVGNNTPIFFIRDP F + +R H+ K F +H
Sbjct: 132 FYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHL-KDPNMIFDFWLHRPEALH 190
Query: 612 QLLYLFGDRGIPDGYRHMNGYGSHTFQ 692
Q+++LF DRG+PDGYRHMNGYGSHTF+
Sbjct: 191 QVMFLFSDRGLPDGYRHMNGYGSHTFK 217
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 49 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 228
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 229 ERIPERVV 252
ERIPERVV
Sbjct: 63 ERIPERVV 70
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 201 bits (491), Expect = 3e-52
Identities = 92/147 (62%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
AKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSADT RDPRGFA+K
Sbjct: 72 AKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIK 131
Query: 435 FYTDDGVWDLVGNNTPIFFIRDPT-FSRVLSILRRETLQHI*KIQTCFGTF*P*DQRTIH 611
FYT++G WDLVGNNTPIFFIRDP F + +R H+ K F +H
Sbjct: 132 FYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHL-KDPNMIFDFWLHRPEALH 190
Query: 612 QLLYLFGDRGIPDGYRHMNGYGSHTFQ 692
Q+++LF DRG+PDGYRHMNGYGSHTF+
Sbjct: 191 QVMFLFSDRGLPDGYRHMNGYGSHTFK 217
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 49 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 228
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 229 ERIPERVV 252
ERIPERVV
Sbjct: 63 ERIPERVV 70
>Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2
protein.
Length = 497
Score = 193 bits (471), Expect = 9e-50
Identities = 91/147 (61%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
AKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++K
Sbjct: 72 AKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLK 131
Query: 435 FYTDDGVWDLVGNNTPIFFIRDPT-FSRVLSILRRETLQHI*KIQTCFGTF*P*DQRTIH 611
FYT++G WDLVGNNTPIFFIRD F + L+R H+ F F +IH
Sbjct: 132 FYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALF-DFWMNRPESIH 190
Query: 612 QLLYLFGDRGIPDGYRHMNGYGSHTFQ 692
Q+++L+ DRGIPDG+R MNGYG+HTF+
Sbjct: 191 QVMFLYSDRGIPDGFRFMNGYGAHTFK 217
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 49 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 228
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 229 ERIPERVV 252
ERIPERVV
Sbjct: 63 ERIPERVV 70
>AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.6 protein.
Length = 497
Score = 193 bits (471), Expect = 9e-50
Identities = 91/147 (61%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
AKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++K
Sbjct: 72 AKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLK 131
Query: 435 FYTDDGVWDLVGNNTPIFFIRDPT-FSRVLSILRRETLQHI*KIQTCFGTF*P*DQRTIH 611
FYT++G WDLVGNNTPIFFIRD F + L+R H+ F F +IH
Sbjct: 132 FYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALF-DFWMNRPESIH 190
Query: 612 QLLYLFGDRGIPDGYRHMNGYGSHTFQ 692
Q+++L+ DRGIPDG+R MNGYG+HTF+
Sbjct: 191 QVMFLYSDRGIPDGFRFMNGYGAHTFK 217
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 49 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 228
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 229 ERIPERVV 252
ERIPERVV
Sbjct: 63 ERIPERVV 70
>AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical
protein Y54G11A.13 protein.
Length = 512
Score = 192 bits (467), Expect = 3e-49
Identities = 90/147 (61%), Positives = 109/147 (74%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
AKG GA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++K
Sbjct: 87 AKGGGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLK 146
Query: 435 FYTDDGVWDLVGNNTPIFFIRDPT-FSRVLSILRRETLQHI*KIQTCFGTF*P*DQRTIH 611
FYT++G WDLVGNNTPIFFIRD F + L+R H+ F F +IH
Sbjct: 147 FYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALF-DFWMNRPESIH 205
Query: 612 QLLYLFGDRGIPDGYRHMNGYGSHTFQ 692
Q+++L+ DRGIPDG+R MNGYG+HTF+
Sbjct: 206 QVMFLYSDRGIPDGFRFMNGYGAHTFK 232
Score = 75.8 bits (178), Expect = 3e-14
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 10 PHSKKGTYKMASRDP-ATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALL 186
PH T P A DQL Y+ ++ P +TT +GAP+ KTA+ T G+ GP L+
Sbjct: 5 PHMVNLTVNDTKPGPMAEDQLKAYRDRNQE-PHLLTTSNGAPIYSKTAVLTAGRRGPMLM 63
Query: 187 QDVNFLDEMSSFDRERIPERVV 252
QD+ ++DEM+ FDRERIPERVV
Sbjct: 64 QDIVYMDEMAHFDRERIPERVV 85
>U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catalase
protein.
Length = 496
Score = 186 bits (453), Expect = 1e-47
Identities = 88/147 (59%), Positives = 109/147 (74%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
AKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++K
Sbjct: 72 AKGAGAHGYFEVTHDITKYGKADMFHKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLK 131
Query: 435 FYTDDGVWDLVGNNTPIFFIRDPT-FSRVLSILRRETLQHI*KIQTCFGTF*P*DQRTIH 611
FYT++G WDLVGNNTPIFFIRD F + L+R H+ F + ++
Sbjct: 132 FYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFW--MNRPESI 189
Query: 612 QLLYLFGDRGIPDGYRHMNGYGSHTFQ 692
Q+++L+ DRGIPDG+R MNGYG+HTF+
Sbjct: 190 QVMFLYSDRGIPDGFRFMNGYGAHTFK 216
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 49 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 228
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 229 ERIPERVV 252
ERIPERVV
Sbjct: 63 ERIPERVV 70
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 34.3 bits (75), Expect = 0.086
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 52 PATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 228
P T Q +NY LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 34.3 bits (75), Expect = 0.086
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 52 PATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 228
P T Q +NY LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>U49830-3|AAV58879.1| 218|Caenorhabditis elegans Hypothetical
protein C33F10.4c protein.
Length = 218
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 249 GTAKG-AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGS 395
GT +G +GA G+++V HD SAAK+ + G + + V S+VG ++ S
Sbjct: 74 GTTRGKSGADGFYKVDHDYV-MSAAKMAKENGVKQFVLV--SSVGADASS 120
>U49830-1|AAK31483.1| 458|Caenorhabditis elegans Hypothetical
protein C33F10.4a protein.
Length = 458
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 249 GTAKG-AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGS 395
GT +G +GA G+++V HD SAAK+ + G + + V S+VG ++ S
Sbjct: 314 GTTRGKSGADGFYKVDHDYV-MSAAKMAKENGVKQFVLV--SSVGADASS 360
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 448 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 359
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 448 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 359
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 448 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 359
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 1070 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1099
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 448 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 359
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 1048 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1077
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 448 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 359
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 448 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 359
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278
>Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical
protein C23H4.2 protein.
Length = 583
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Frame = +1
Query: 67 LINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQ-----DVNF-LDEMSSFDR 228
L N+ K K SPG+ G ++ + + ++GP +L+ DV+F + EM+ FD+
Sbjct: 423 LTNFTKHGKPSPGWDPVDPGRMNYLELKVDSKARSGPVMLEGYHAKDVSFWVGEMTEFDQ 482
>Z81069-4|CAB02991.1| 370|Caenorhabditis elegans Hypothetical
protein F25H9.4 protein.
Length = 370
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 674 ISIHMSVAIRNTTVSKQV--KKLMDGSLVLRSKSPKTCLDL 558
++++ S IR +SK+ K + DG L+ K+ K CL L
Sbjct: 177 LNVNSSTGIRKEKISKEKYEKYIADGELITDGKTVKVCLAL 217
>Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical
protein T07C12.8 protein.
Length = 965
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 513 GKMLDLL*RKWE-YYFQLNPTLH 448
GK +D+ +KW+ YYF+LNP H
Sbjct: 910 GKDIDVNSQKWKNYYFELNPGQH 932
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,507,300
Number of Sequences: 27780
Number of extensions: 381195
Number of successful extensions: 1100
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -