Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0837
(701 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2... 136 2e-32
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P... 132 3e-31
At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to c... 123 1e-28
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c... 123 1e-28
At3g14205.1 68416.m01795 phosphoinositide phosphatase family pro... 31 0.74
At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family pr... 30 1.7
At2g42490.1 68415.m05256 copper amine oxidase, putative similar ... 30 1.7
At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family pr... 29 3.9
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 29 3.9
At3g59230.1 68416.m06603 F-box family protein contains F-box dom... 28 5.2
At1g48120.1 68414.m05370 calcineurin-like phosphoesterase family... 28 6.9
At1g17030.1 68414.m02069 expressed protein 28 6.9
At5g16700.1 68418.m01955 glycosyl hydrolase family 5 protein / c... 27 9.1
At4g35510.1 68417.m05048 expressed protein 27 9.1
At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)... 27 9.1
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 27 9.1
At1g06070.1 68414.m00636 bZIP transcription factor, putative (bZ... 27 9.1
>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
GI:2511725 from [Arabidopsis thaliana]
Length = 492
Score = 136 bits (328), Expect = 2e-32
Identities = 70/146 (47%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
A+GA A G+FEVTHDIT+ ++A G +TP+ VRFSTV E GS +T+RDPRGFAVK
Sbjct: 66 ARGASAKGFFEVTHDITQLTSADFLRGPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVK 125
Query: 435 FYTDDGVWDLVGNNTPIFFIRD-PTFSRVLSILRRETLQHI*KIQTCFGTF*P*DQRTIH 611
FYT +G +DLVGNN P+FF+RD F ++ L+ HI + F ++H
Sbjct: 126 FYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFF-SHHPESLH 184
Query: 612 QLLYLFGDRGIPDGYRHMNGYGSHTF 689
+LF D GIP YRHM G G +T+
Sbjct: 185 MFSFLFDDLGIPQDYRHMEGAGVNTY 210
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = +1
Query: 94 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVV 252
DSP F TT SGAPV + TVG GP LL+D + L+++++FDRERIPERVV
Sbjct: 13 DSP-FFTTNSGAPVWNNNSSLTVGTRGPILLEDYHLLEKLANFDRERIPERVV 64
>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2
SP:P25819, GI:17865693 from [Arabidopsis thaliana]
Length = 492
Score = 132 bits (318), Expect = 3e-31
Identities = 69/146 (47%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
A+GA A G+FEVTHDI+ + A + G +TP+ VRFSTV E GS +T+RDPRGFAVK
Sbjct: 66 ARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVK 125
Query: 435 FYTDDGVWDLVGNNTPIFFIRD-PTFSRVLSILRRETLQHI*KIQTCFGTF*P*DQRTIH 611
FYT +G +DLVGNN P+FFIRD F ++ L+ HI + F +++
Sbjct: 126 FYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFF-SHHPESLN 184
Query: 612 QLLYLFGDRGIPDGYRHMNGYGSHTF 689
+LF D GIP YRHM+G G +T+
Sbjct: 185 MFTFLFDDIGIPQDYRHMDGSGVNTY 210
Score = 61.3 bits (142), Expect = 6e-10
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = +1
Query: 94 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVV 252
+SP F TT SGAPV + TVG GP LL+D + ++++++FDRERIPERVV
Sbjct: 13 NSP-FFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVV 64
>At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 427
Score = 123 bits (296), Expect = 1e-28
Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
A+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +T+RD RGFAVK
Sbjct: 66 ARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVK 125
Query: 435 FYTDDGVWDLVGNNTPIFFIRDP-TFSRVLSILR---RETLQHI*KIQTCFGTF*P*DQR 602
FYT +G +DLVGNNTP+FFIRD F V+ L+ + +Q +I
Sbjct: 126 FYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHL----PE 181
Query: 603 TIHQLLYLFGDRGIPDGYRHMNGYGSHTF 689
++ ++F D GIP YRHM G+G HT+
Sbjct: 182 SLLTWCWMFDDVGIPQDYRHMEGFGVHTY 210
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +1
Query: 76 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVV 252
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVV
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVV 64
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 492
Score = 123 bits (296), Expect = 1e-28
Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 434
A+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +T+RD RGFAVK
Sbjct: 66 ARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVK 125
Query: 435 FYTDDGVWDLVGNNTPIFFIRDP-TFSRVLSILR---RETLQHI*KIQTCFGTF*P*DQR 602
FYT +G +DLVGNNTP+FFIRD F V+ L+ + +Q +I
Sbjct: 126 FYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHL----PE 181
Query: 603 TIHQLLYLFGDRGIPDGYRHMNGYGSHTF 689
++ ++F D GIP YRHM G+G HT+
Sbjct: 182 SLLTWCWMFDDVGIPQDYRHMEGFGVHTY 210
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +1
Query: 76 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVV 252
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVV
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVV 64
>At3g14205.1 68416.m01795 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain; identical to SAC domain protein 2
(SAC2) GI:31415720
Length = 808
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 453 LHHQYRTLQQNLEGHEQYQQIHSLHQ-LLRI*QQSVSFCLWTQIL 322
+H R L N+EGH Y+ + ++ L R + +V C+WT L
Sbjct: 176 MHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVAL 220
>At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 326
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 85 TLKDSPGFITTKSGAPVGIKTAIQTVG 165
+L D+PGFI GAP + AI +G
Sbjct: 29 SLADAPGFIKAPGGAPANVAIAISRLG 55
>At2g42490.1 68415.m05256 copper amine oxidase, putative similar to
copper methylamine oxidase precursor (MAOXII)
[Arthrobacter sp.] SWISS-PROT:Q07123
Length = 776
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 672 IHSYVCSHQEYHGLQTSKEVDGWFSGL-KVKKSQNMSGSFRC 550
I + VC H+E HG+ + W +GL +V++S+ ++ SF C
Sbjct: 452 IENCVCLHEEDHGILWKHQ--DWRTGLAEVRRSRRLTVSFLC 491
>At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family
protein similar to fructokinase GI:2102693 from
[Lycopersicon esculentum]
Length = 345
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 85 TLKDSPGFITTKSGAPVGIKTAIQTVG 165
+L +SPGF+ GAP + A+ +G
Sbjct: 29 SLSESPGFLKAPGGAPANVAIAVSRLG 55
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 123 WSSCWNQNGDTNGGQEWS 176
WS WN NG T EWS
Sbjct: 868 WSDGWNNNGGTKEKNEWS 885
>At3g59230.1 68416.m06603 F-box family protein contains F-box domain
Pfam:PF00646
Length = 491
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 519 KLGKMLDLL*RKWEYYFQLNPTLHHQYRTLQQNLEGHEQYQQIHS 385
K + LL RKW Y+F P L Q G+++ +IH+
Sbjct: 32 KEAAITSLLSRKWRYFFAFVPNLDFDDPVRMQPDMGNQEETEIHT 76
>At1g48120.1 68414.m05370 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 1338
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 606 IHQLLYLFGDRGIPDGYR 659
+H LLYL D G PDG R
Sbjct: 663 LHDLLYLMQDAGFPDGDR 680
>At1g17030.1 68414.m02069 expressed protein
Length = 502
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 459 PTLHHQYRTLQQNLEGH 409
P++HH+Y +L N EGH
Sbjct: 190 PSMHHEYTSLVDNEEGH 206
>At5g16700.1 68418.m01955 glycosyl hydrolase family 5 protein /
cellulase family protein cellulase (EC 3.2.1.4)
precursor - Xanthomonas campestris pv. campestris,
PIR:JH0158
Length = 488
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 568 VWIFQMCCRVSLLSMDKTRENVGSLIKKMGVLFPTKSH 455
+WI +MC + K + VG+ K+G + TK H
Sbjct: 405 LWINKMCVEAPNVVGQKVKLGVGTKCSKLGQISATKMH 442
>At4g35510.1 68417.m05048 expressed protein
Length = 333
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -2
Query: 538 SLLSMDKTRENVGSLIKKMGVLFPTKSHTPSSV*NFTAKPRGSRTVSADPLSPP 377
S+L M+K+ E SL+K+ G + K P S+ N + G+ + S P++ P
Sbjct: 247 SMLMMEKSGEESNSLVKRRGRVKLKK--LPLSICNSRNQENGTSSASPLPVAQP 298
>At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 526
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 236 IRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGA 126
+R S D++++ L + N+ GP + I VL+P G+
Sbjct: 119 VRKESNSDLNAKSLENGNEQGPQTYPMHIPVLVPLGS 155
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 236 IRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGA 126
+R S D++++ L + N+ GP + I VL+P G+
Sbjct: 201 VRKESNSDLNAKSLENGNEQGPQTYPMHIPVLVPLGS 237
>At1g06070.1 68414.m00636 bZIP transcription factor, putative
(bZIP69) similar to transcriptional activator RF2a
GB:AF005492 GI:2253277 from [Oryza sativa]; contains
Pfam profile PF00170: bZIP transcription factor
Length = 423
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 447 HQYRTLQQNLEGHEQYQQIHSLHQLLRI*QQ 355
HQ + QQ + H Q QQ++ L Q R+ QQ
Sbjct: 359 HQQQQQQQQQQFHFQQQQLYQLQQQQRLQQQ 389
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,729,710
Number of Sequences: 28952
Number of extensions: 363535
Number of successful extensions: 1022
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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