Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0836
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.96 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   1.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   1.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   3.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
 Frame = +1

Query: 532 YYNFICFIVSVLNIISNDFKNTAIFF--CINYF-----LISVSFLFL 651
           YY FI F V +L ++   +    +FF  CI YF     + +V  LFL
Sbjct: 117 YYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFL 163


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 515 YYIQFDIIILSVLLCQF 565
           YY+ FD+I++S  L  F
Sbjct: 220 YYLYFDVIVISTFLQLF 236



 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 62 HDGQCKCLEGKK 97
          HDG+ K LEG++
Sbjct: 15 HDGRVKLLEGRR 26


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 515 YYIQFDIIILSVLLCQF 565
           YY+ FD+I++S  L  F
Sbjct: 146 YYLYFDVIVISTFLQLF 162


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 562 VLNIISNDFKNTAIFFCINYFLISVSFLFLTR 657
           V   + +DF+N   FFC + F++ +  L L +
Sbjct: 38  VKTYLVSDFENYVTFFC-SLFIVVILKLILAK 68


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 565 LNIISNDFKNTAIFFCINYFLISVSFLFLTR 657
           + I+   FK  +++ C NY++I V+  +  R
Sbjct: 63  IKIVLMFFKEASLY-CFNYYVIVVTTFYKRR 92


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 2    PQYVAPGVSFNP 37
            PQ  APG+ +NP
Sbjct: 1231 PQNCAPGLHYNP 1242


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/43 (18%), Positives = 19/43 (44%)
 Frame = +1

Query: 517 LYSI*YYNFICFIVSVLNIISNDFKNTAIFFCINYFLISVSFL 645
           LY   Y +  C++    + I +   N     C  Y+++ ++ +
Sbjct: 137 LYIFTYLSVTCYVTYAWSPIDHTESNIINDMCSLYYILQITLI 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,178
Number of Sequences: 336
Number of extensions: 2810
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)