Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0836
         (659 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.4  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   6.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 202 NWSVFVLSNSFKRENKINY 146
           N+S + L++ +  ENK+NY
Sbjct: 204 NYSGWYLNHDYNLENKLNY 222


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 2   PQYVAPGVSFNPSLTDALH 58
           P+Y  P  +F P  TD+ H
Sbjct: 157 PRYKRPRTTFEPRATDSRH 175


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 252 RNVINDVFHIVIRFFLC 302
           RNVI  +  +V+ FF+C
Sbjct: 281 RNVIRMLVAVVVAFFIC 297


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 252 CKYIYIYLFSKLVTLIGTGVS 190
           C Y+ +Y  S  V  +G GVS
Sbjct: 217 CTYVALYPSSVQVIALGVGVS 237


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,514
Number of Sequences: 438
Number of extensions: 3192
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)