Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0835
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   1.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.2  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -2

Query: 317 CTEECRL*ALRRSCPYPLRCSWFAGDHPNPFQGLVGQLLAVFAV 186
           C E+C L  +    P      ++  D  N F GLVG ++    V
Sbjct: 241 CCEKCGLKKIEFCRPTFSAARFYGIDFSNTFLGLVGAVVTFLIV 284


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 372 WPSSAWRISTLSSKPQDSWVY 434
           W   A   S L  +P D W Y
Sbjct: 220 WAGFADSHSPLYKRPHDQWAY 240


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 472 LPQVDSLKSFLCRYTQLS 419
           +PQ++ + +FL R+T  S
Sbjct: 299 IPQLEEMSNFLKRHTGFS 316


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 396  STLSSKPQDSWVYRHRKLFK 455
            S+++ KP DSW     + +K
Sbjct: 2363 SSMTLKPHDSWADIDNEFYK 2382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,738
Number of Sequences: 336
Number of extensions: 3152
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)