Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0835
(561 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 36 0.022
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 33 0.16
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 33 0.21
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 32 0.27
01_06_0201 - 27477392-27479728 31 0.83
07_01_0773 + 5963165-5963306,5963440-5963489,5963580-5963645,596... 30 1.1
06_03_0323 - 19579118-19579489 30 1.1
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 30 1.5
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 29 2.5
08_02_0916 - 22592039-22592196,22592361-22592781 28 4.4
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 28 5.9
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 28 5.9
04_04_1030 - 30249160-30250403,30250787-30251666 28 5.9
03_05_0637 - 26312348-26313004,26313507-26313575,26313799-26314071 28 5.9
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 28 5.9
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 27 7.7
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 27 7.7
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 27 7.7
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 27 7.7
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 35.9 bits (79), Expect = 0.022
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMIKKI-NTSSMAFKCMENINAFLEAARQLGVPAQETF 451
D E+L DGT+LC + N + P ++++ + + + ++ FL +G+P F
Sbjct: 40 DELRELLSDGTVLCHIVNALIPGVLEESWGAYASSDQHAGHVKKFLAVVADMGLPG---F 96
Query: 452 QTVDLWERQNLNSVVICL 505
DL E +++ VV CL
Sbjct: 97 SVKDL-EEGSMSGVVDCL 113
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 430
D+ + + KDG LLCKL N P I + INT + ++ EN L +A+ +G
Sbjct: 187 DHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKAIG 242
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +2
Query: 293 LKDGTLLCKLANNIHPNMIKKI---------NTSSMAFKCMENINAFLEAARQLGVPAQE 445
L++G +LC N + P + K+ + A++ EN+ FL + LG+P
Sbjct: 88 LRNGIVLCNALNKVQPGSVPKVVEAPSDSADGAALCAYQYFENVRNFLMGLQDLGLP--- 144
Query: 446 TFQTVDLWERQNLNSVVICL 505
TF+ DL + VV C+
Sbjct: 145 TFEASDLEKGGKGVRVVDCV 164
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 172 PRERSTANTARSWPTSPWNGFG*SPANQEHLRGYGQLLRSA*RRHSSVQASQQHPP 339
PR R + + +S P S W G + H R G+ + RRH S + H P
Sbjct: 164 PRRRRSPSYGKSGPPSHWGSHGADREERLHSRRDGRGYSRSPRRHDSPSNQRNHSP 219
>01_06_0201 - 27477392-27479728
Length = 778
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 210 PAPRCICC*SFSGLQLQILIWSLGCLPFRTNN 115
P PRC C + L+ WS GC P TNN
Sbjct: 291 PGPRCSCLPGYEMADLEN--WSKGCQPMFTNN 320
>07_01_0773 +
5963165-5963306,5963440-5963489,5963580-5963645,
5964162-5964188,5965320-5965375,5966613-5966681,
5966901-5966995,5967141-5967251,5970545-5970879,
5971218-5971253,5971254-5971421
Length = 384
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 240 SSESIPRTRGPAPRCICC*SF 178
S E PR RGP PRC C S+
Sbjct: 5 SPERSPRRRGPTPRCSACESY 25
>06_03_0323 - 19579118-19579489
Length = 123
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 375 PSSAWRISTLSSKPQDSWVYRHRKLFKLSTCGRDRISTPS*SACSTGQRGWNLREAVNRT 554
PS+ W +ST +S +D W H ++ + R PS S + W+L E R
Sbjct: 3 PSTNWGVSTWASASEDRWHAPHDIHWRDNQPSRSSGVPPSPSEWRSSSSRWDLGEITRRM 62
Query: 555 E 557
+
Sbjct: 63 D 63
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 320 LANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVI 499
+ N ++++ + AF+ EN+ FL AA+++G+P F+ DL + VV
Sbjct: 121 VVNTAADSVLQPDGAALSAFQYFENVRNFLVAAQEIGLPC---FEASDLEQGGKSARVVN 177
Query: 500 CL 505
C+
Sbjct: 178 CV 179
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSS--MAFKCMENINAFLEAARQLG 430
++ + +++DG LLCKL N P I + INT ++ EN L +A+ +G
Sbjct: 157 NDIFNLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIG 212
>08_02_0916 - 22592039-22592196,22592361-22592781
Length = 192
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 166 LKPRERSTANTARSWPTSPW 225
L+ R+R+T+ TAR+W PW
Sbjct: 29 LRSRQRATSLTARNWCRRPW 48
>10_08_0472 -
18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 170 SPEKDQQQIQRGAGPRVLGMDSDDHRRTKNTSGDMDNF-YEVLKDGTL 310
S DQ + RG GP LG +SD RR + + EVL DG L
Sbjct: 384 SKHPDQDRFIRGLGPISLGGESDHDRRADDLKLLYRAYATEVLSDGHL 431
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 179 KDQQQIQRGAGPRVLGMDSDDHRRTKNTSGDMD--NFYEVLKDGTLL 313
+D+ + AG V+GM SDD + + D+D +F+ L+DG +L
Sbjct: 6 EDRAAVAGDAGMEVVGMSSDDMDQFDFSVDDIDFGDFFLRLEDGDVL 52
>04_04_1030 - 30249160-30250403,30250787-30251666
Length = 707
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 263 RCSWFAGDHPNPFQGLVGQLLAVFAVDLSLGF 168
RC+ G NP+ G VG L + AV + LGF
Sbjct: 277 RCNCSGGYTGNPYIGCVGGSLGLMAVLIVLGF 308
>03_05_0637 - 26312348-26313004,26313507-26313575,26313799-26314071
Length = 332
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 235 RIHSKDSWASSSLYLLLIFLWASAANPDLVARL 137
RIH + W +YLL W SAA DLV L
Sbjct: 67 RIHRQQPW-KHRIYLLWAAEWRSAAKEDLVFAL 98
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 430
+ +++++DG LLCKL N P I + IN + ++ EN L +A+ +G
Sbjct: 160 NQLFDLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIG 215
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 104 FIKLLLVRNGKQPSDQIRICS*SPEKDQQQIQRG 205
F+KL+ VRNG PSD I C+ P + + G
Sbjct: 86 FLKLIPVRNGSSPSD-IEECTNVPSVAAESLLEG 118
>07_03_0603 -
19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 278 NFYEVLKDGTLLCKLANNIHPN---MIKKINTSSMAFKCMENINAFLEAARQLGVPAQE 445
N +E L+DG +LC++ + + ++K I S K + N ++ +Q G P +
Sbjct: 410 NLFEDLQDGIILCRIIQLLTSDASIILKVIAPSDTYKKRLHNCTMAIQYIKQAGFPLSD 468
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +2
Query: 41 ACLHSVHSDFTFYRVCDLFK*FIKLLLVRNGKQPSDQIRIC 163
A + S+HS T + VC + ++ + V K+ ++ C
Sbjct: 26 AIIGSMHSSMTLFSVCKILSLYVDMCFVDYSKEVHSYLKYC 66
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 499 DHDGVEILSLPQVDSLKSFLCRYTQLSCG 413
DH G+EI+ D+ K +L Y CG
Sbjct: 146 DHMGMEIIETGNPDAFKQYLQEYENTICG 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,304,042
Number of Sequences: 37544
Number of extensions: 378403
Number of successful extensions: 1079
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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