Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0835
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 99 2e-21
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 99 2e-21
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 89 3e-18
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 66 2e-11
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 44 6e-05
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 44 6e-05
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 44 6e-05
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical... 29 2.3
U42844-6|AAB53814.1| 344|Caenorhabditis elegans Hypothetical pr... 29 3.0
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 28 5.3
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 5.3
Z81526-5|CAB04262.1| 983|Caenorhabditis elegans Hypothetical pr... 27 7.0
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 27 7.0
AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical ... 27 7.0
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 27 7.0
U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical pr... 27 9.2
U58752-7|AAB00669.1| 343|Caenorhabditis elegans Hypothetical pr... 27 9.2
AC006633-5|AAO21429.1| 506|Caenorhabditis elegans Prion-like-(q... 27 9.2
AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans Prion-like-(q... 27 9.2
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 99.1 bits (236), Expect = 2e-21
Identities = 48/94 (51%), Positives = 63/94 (67%)
Frame = +2
Query: 257 NTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVP 436
+TSG+ DNF+ +LKDGTLLCK AN I IKK+ F CMENINAF+E A++ GVP
Sbjct: 43 STSGERDNFHNLLKDGTLLCKAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVP 102
Query: 437 AQETFQTVDLWERQNLNSVVICLQHWAERLEPTG 538
+ETFQ+V+L E ++L SV + L L+ G
Sbjct: 103 NEETFQSVELVEGRDLFSVCVTLLSLGRVLQKAG 136
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 138 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPRTPQG 269
NR T G ++K +SK+ ++ A LEWI+ ++GE + G
Sbjct: 3 NRTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSG 46
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 98.7 bits (235), Expect = 2e-21
Identities = 49/96 (51%), Positives = 66/96 (68%)
Frame = +2
Query: 257 NTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVP 436
+T GD DN +V +DG+LLC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V
Sbjct: 48 DTQGDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQ 106
Query: 437 AQETFQTVDLWERQNLNSVVICLQHWAERLEPTGSR 544
E FQTVDL+E Q+ N+V+ICL A + E R
Sbjct: 107 KSELFQTVDLYEGQDPNAVLICLASLARKSEKNFGR 142
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +3
Query: 132 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPRTPQG 269
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ QG
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQG 51
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 98.7 bits (235), Expect = 2e-21
Identities = 49/96 (51%), Positives = 66/96 (68%)
Frame = +2
Query: 257 NTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVP 436
+T GD DN +V +DG+LLC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V
Sbjct: 48 DTQGDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQ 106
Query: 437 AQETFQTVDLWERQNLNSVVICLQHWAERLEPTGSR 544
E FQTVDL+E Q+ N+V+ICL A + E R
Sbjct: 107 KSELFQTVDLYEGQDPNAVLICLASLARKSEKNFGR 142
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +3
Query: 132 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPRTPQG 269
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ QG
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQG 51
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 88.6 bits (210), Expect = 3e-18
Identities = 45/88 (51%), Positives = 56/88 (63%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQ 454
DNF E LKDG LCKL N I +KKI F C+ENIN F AAR LGV +ETFQ
Sbjct: 52 DNFREQLKDGQRLCKLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQ 111
Query: 455 TVDLWERQNLNSVVICLQHWAERLEPTG 538
+VDL++ ++L SV + LQ A ++E G
Sbjct: 112 SVDLFDGRDLFSVTVTLQSLARKVEKLG 139
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 TKNTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTS-SMAFKCMENINAFLEAARQL 427
T +S D+ N +LKDG +LCKL + P+ N MAF MENI+ FL AA+Q
Sbjct: 48 TCESSTDVSN---LLKDGVMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQF 104
Query: 428 GVPAQETFQTVDLWERQNLNSVVICLQ 508
GV FQTVDL+E + V+ CL+
Sbjct: 105 GVMEISCFQTVDLYENKQCYKVIECLR 131
Score = 31.1 bits (67), Expect = 0.57
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 138 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGE 251
N G + E Q+K ++++ E A E L+WI +TGE
Sbjct: 3 NHGPSYGLSRELQKKNDARFVLEEAIEVLKWIENVTGE 40
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +2
Query: 251 TKNTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF 406
T + +G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F
Sbjct: 22 TTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYF 77
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +2
Query: 251 TKNTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF 406
T + +G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F
Sbjct: 54 TTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYF 109
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +2
Query: 251 TKNTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF 406
T + +G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F
Sbjct: 54 TTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYF 109
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 266 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINT--SSMA-FKCMENINAFLEAARQLGVP 436
GD+ +F L DG LCK N +HP I ++ SS+A + N++ FL+ R++GVP
Sbjct: 540 GDI-SFSLQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVP 598
Query: 437 AQETFQTVDLWERQNLNSV 493
+D+ ++N V
Sbjct: 599 ETTLCSQMDIISKRNPQKV 617
>AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical
protein Y56A3A.16 protein.
Length = 619
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 165 AEAQRKINSKYSEELAHESLEWIRMITGEPRTPQGIWTTSTKC 293
A A RK + KYS E+ S +WI I +P QG+ + KC
Sbjct: 304 APASRK-HDKYSYEVPPLSEDWILTIHKQPPIRQGLESQQWKC 345
>U42844-6|AAB53814.1| 344|Caenorhabditis elegans Hypothetical
protein C08A9.6 protein.
Length = 344
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 256 EHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRK 420
EHL + S + +S PP+ D QHI G QVH + ++P K
Sbjct: 244 EHLPDSSAKIYSTNIKSASCAPESTEPPKSDNSAQHI--GEQVHRLFAQYPERSK 296
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 242 HRRTKNTSGDMDNFYEVLKDGTLLCKL 322
H ++SG +++ +E ++DG LLC L
Sbjct: 36 HLEEHSSSGRIEDLFEDIRDGVLLCHL 62
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 242 HRRTKNTSGDMDNFYEVLKDGTLLCKL 322
H ++SG +++ +E ++DG LLC L
Sbjct: 36 HLEEHSSSGRIEDLFEDIRDGVLLCHL 62
>Z81526-5|CAB04262.1| 983|Caenorhabditis elegans Hypothetical
protein F33H2.1 protein.
Length = 983
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 195 YSEELAHESLEWIRMITGEPRTP 263
Y E L E L WIR ++ E +TP
Sbjct: 461 YLEHLILEMLRWIRQVSTEAKTP 483
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 154 QDLQLKPRERSTANTARSWPTSPW 225
++L PR R TANT RS +SPW
Sbjct: 97 EELNFSPR-RLTANTTRSPVSSPW 119
>AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical
protein M151.6 protein.
Length = 352
Score = 27.5 bits (58), Expect = 7.0
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -3
Query: 226 SKDSWASSSLYLLLIFLWASAANPDL--VARLFAISN**QFNK--LFK*ITDTVEGEVTV 59
+KDS SS + LL+ W +NP L + LF+ +N + + +F ITD + EV
Sbjct: 262 TKDSQFSSKDFNLLLKNWLRGSNPYLLNIVMLFSEANENRLVETIIFDGITDCIALEVQG 321
Query: 58 YRM*TGRRVNGTR 20
+ T + +GT+
Sbjct: 322 MKQFTVEKHDGTK 334
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 27.5 bits (58), Expect = 7.0
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +3
Query: 39 RPVYILYTVTSPSTVSVIYLNNLLNCY*FEMANNRATKSGFAAEAQRKINSKYSEELAHE 218
RP YI+Y V S + Y LL+ +AN + S E N+ +S +
Sbjct: 1397 RPTYIIYVVGSTNLTGTSYSKQLLSGQQLYVANYNQSASTNFQELVYSSNNVFSVSSSIH 1456
Query: 219 SLEWIRMITGEPRTPQGIWTTSTK 290
L R+++ + TP + S +
Sbjct: 1457 LLN--RVVSMQVSTPNPVLALSNR 1478
>U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical
protein C10G11.7 protein.
Length = 338
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Frame = +2
Query: 254 KNTSGDMDNFYEVLKDGTLLCKLANNIHPNMIK----KINTSSMAFKCME--NINAF-LE 412
K+ + + F KDG +L KLAN + P ++ + N + A K ++ NI+AF
Sbjct: 148 KDQATTRNQFIGFFKDGDVLAKLANALEPGAVEVAAAEENADAAAQKEVQKKNIDAFGAW 207
Query: 413 AARQLGVPA 439
A + LG A
Sbjct: 208 AQKTLGTEA 216
>U58752-7|AAB00669.1| 343|Caenorhabditis elegans Hypothetical
protein B0218.7 protein.
Length = 343
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 511 VLQADHDGVEILSLPQVDSLKSFLCRY 431
++ HD V + S+P DS +S RY
Sbjct: 95 IITLSHDAVNLASIPPTDSAESLQSRY 121
>AC006633-5|AAO21429.1| 506|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform b protein.
Length = 506
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +2
Query: 236 DDHRRTKNTS-GDMDNFYEVLKDGTLLCKLANNIHPNMIK----KINTSSMAFKCMENI 397
D R NT+ +M++ YE + DG LC L + P+ + N S+ C N+
Sbjct: 185 DVEREDSNTNIPEMEDLYEDISDGQCLCALLHWYRPHEMPVADISFNDSATTRDCQYNL 243
>AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform a protein.
Length = 1128
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +2
Query: 236 DDHRRTKNTS-GDMDNFYEVLKDGTLLCKLANNIHPNMIK----KINTSSMAFKCMENI 397
D R NT+ +M++ YE + DG LC L + P+ + N S+ C N+
Sbjct: 185 DVEREDSNTNIPEMEDLYEDISDGQCLCALLHWYRPHEMPVADISFNDSATTRDCQYNL 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,334,761
Number of Sequences: 27780
Number of extensions: 315475
Number of successful extensions: 918
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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