Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0835
(561 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47500.1 68415.m05929 kinesin motor protein-related 41 5e-04
At3g10310.1 68416.m01237 kinesin motor protein-related similar t... 38 0.006
At5g48460.1 68418.m05992 fimbrin-like protein, putative strong s... 37 0.008
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ... 36 0.014
At5g27000.1 68418.m03221 kinesin motor protein-related non-conse... 36 0.024
At5g35700.1 68418.m04269 fimbrin-like protein, putative similar ... 35 0.043
At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical t... 34 0.075
At1g09170.1 68414.m01024 kinesin motor protein-related similar t... 33 0.099
At2g04750.1 68415.m00485 fimbrin-like protein, putative similar ... 33 0.13
At3g44730.1 68416.m04814 kinesin motor protein-related similar t... 31 0.53
At4g16820.1 68417.m02539 lipase class 3 family protein similar t... 31 0.70
At5g41310.1 68418.m05020 kinesin motor protein-related 30 0.92
At3g32270.1 68416.m04114 hypothetical protein similar to putativ... 29 1.6
At3g02140.1 68416.m00182 expressed protein 29 1.6
At1g63640.2 68414.m07198 kinesin motor protein-related C-termina... 29 2.1
At1g63640.1 68414.m07197 kinesin motor protein-related C-termina... 29 2.1
At2g06690.1 68415.m00747 hypothetical protein includes At2g06610... 28 3.7
At4g15830.1 68417.m02408 expressed protein 27 6.5
At4g04920.1 68417.m00715 expressed protein 27 6.5
At2g27760.1 68415.m03364 tRNA isopentenyltransferase 2 / IPP tra... 27 6.5
At2g45880.1 68415.m05706 glycosyl hydrolase family 14 protein si... 25 7.1
At1g63750.1 68414.m07214 disease resistance protein (TIR-NBS-LRR... 27 8.6
>At2g47500.1 68415.m05929 kinesin motor protein-related
Length = 974
Score = 41.1 bits (92), Expect = 5e-04
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Frame = +2
Query: 293 LKDGTLLCKLANNIHPNMIKKINTSSM------------AFKCMENINAFLEAARQLGVP 436
L+ G +LCK+ N + P + K+ S AF+ EN+ FL A +++G P
Sbjct: 79 LRSGIILCKVLNKVQPGAVSKVVESPCDAILVADGAPLSAFQYFENVRNFLVAIQEMGFP 138
Query: 437 AQETFQTVDLWERQNLNSVVICL 505
TF+ DL + N + VV C+
Sbjct: 139 ---TFEASDLEQGGNASRVVNCV 158
>At3g10310.1 68416.m01237 kinesin motor protein-related similar to
carboxy-terminal kinesin 2 GB:P79955 [Xenopus laevis]
Length = 897
Score = 37.5 bits (83), Expect = 0.006
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +2
Query: 281 FYEVLKDGTLLCKLANNIHPNMIKKI--NTSSM--------AFKCMENINAFLEAARQLG 430
F L++G +LC N IHP + K+ N S + A++ EN+ FL A L
Sbjct: 47 FISCLRNGMILCNAINKIHPGAVSKVVENYSYLNGEYQLPPAYQYFENVRNFLVALETLR 106
Query: 431 VPAQETFQTVDLWERQNLNS 490
+P F+ DL E+ NL S
Sbjct: 107 LPG---FEASDL-EKDNLES 122
>At5g48460.1 68418.m05992 fimbrin-like protein, putative strong
similarity to fimbrin-like protein AtFim2 [Arabidopsis
thaliana] GI:2737926; contains Pfam profile PF00307:
Calponin homology (CH) domain
Length = 654
Score = 37.1 bits (82), Expect = 0.008
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 430
++ +EV KDG LLCKL N P I + INT SM ++ EN L +A+ +G
Sbjct: 155 NDLFEVAKDGVLLCKLINVAVPGTIDERAINTKSMLNPWERNENHTLCLNSAKAIG 210
>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 714
Score = 36.3 bits (80), Expect = 0.014
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +2
Query: 269 DMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 430
D ++ YE++KDG LLCKL N P I + INT + ++ EN L +A+ +G
Sbjct: 153 DSNDLYELVKDGVLLCKLINIAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVG 210
>At5g27000.1 68418.m03221 kinesin motor protein-related
non-consensus AT donor splice site at exon 12;
non-consensus AC acceptor splice site at exon 13
Length = 987
Score = 35.5 bits (78), Expect = 0.024
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2
Query: 293 LKDGTLLCKLANNIHPNMIKKI---------NTSSMAFKCMENINAFLEAARQLGVPAQE 445
L+ G +LC + N ++P + K+ + AF+ ENI FL A ++G+P+ E
Sbjct: 79 LRSGIVLCNVLNKVNPGSVSKVVEAPDDVADGAALSAFQYFENIRNFLVAIEEMGLPSFE 138
Query: 446 TFQTVDLWERQNLNSVVICLQHWAE 520
+ + + ++ L+ ++E
Sbjct: 139 ASDMEKGGKSIRIVNCILALKSYSE 163
>At5g35700.1 68418.m04269 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893, fimbrin [Schizosaccharomyces pombe]
GI:3057144; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 687
Score = 34.7 bits (76), Expect = 0.043
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +2
Query: 281 FYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 430
F++++KDG LLCKL N P I + INT ++ EN+ L +A+ +G
Sbjct: 155 FFDLVKDGVLLCKLINVAVPGTIDERAINTKKTLNPWERNENLTLGLNSAKAIG 208
>At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893
Length = 687
Score = 33.9 bits (74), Expect = 0.075
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 430
+ YE++KDG LLCKL N P I + INT + ++ EN L +A+ +G
Sbjct: 154 NQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVG 209
>At1g09170.1 68414.m01024 kinesin motor protein-related similar to
GB:AAB61066
Length = 1010
Score = 33.5 bits (73), Expect = 0.099
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 12/101 (11%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMIKKI------------NTSSMAFKCMENINAFLEAA 418
++F L+ G LLC + N + P + K+ + AF+ EN+ FL
Sbjct: 83 EDFRIALRSGILLCNVLNRVKPGAVPKVVEAPNDPLVNQDGAALSAFQYFENLRNFLVFV 142
Query: 419 RQLGVPAQETFQTVDLWERQNLNSVVICLQHWAERLEPTGS 541
++G+P E + + V+ L+ + E + GS
Sbjct: 143 EEMGIPTFEVSDFEKGGKSARIVECVLALKSYREWKQSGGS 183
>At2g04750.1 68415.m00485 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 652
Score = 33.1 bits (72), Expect = 0.13
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +2
Query: 284 YEVLKDGTLLCKLANNIHPNMI--KKINTSS--MAFKCMENINAFLEAARQLG 430
++++KDG LLCKL N P I + INT ++ EN++ L +A+ +G
Sbjct: 150 FDLVKDGVLLCKLINIAVPGTIDERAINTKKELNPWERTENLSLCLNSAKAIG 202
>At3g44730.1 68416.m04814 kinesin motor protein-related similar to 4
other kinesin-like proteins of A. thaliana: F02P16.12
(PID:g2191180), katA (D11371), katB (D21137), and katC
(D21138); contains non-consensus AT-AC splice sites at
intron 10
Length = 1087
Score = 31.1 bits (67), Expect = 0.53
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMIKKI-------------NTSSMAFKCMENINAFLEA 415
D F L++G +LC + N ++P + K+ + A + EN+ FL+A
Sbjct: 16 DEFSLALRNGLILCNVLNKVNPGSVLKVVENPITPAIQYADGAAQSAIQYFENMRNFLKA 75
Query: 416 ARQLGVPAQETFQTVDLWERQNLNSVVICL 505
+ + TF DL + + N VV C+
Sbjct: 76 VEDMQL---LTFGASDLEKGGSSNKVVDCI 102
>At4g16820.1 68417.m02539 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 517
Score = 30.7 bits (66), Expect = 0.70
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 139 TERPNQDLQLKPRERSTANTARSW--PTSPWNGFG*SPANQEHLRGYGQLLRSA 294
T PN D+ R R T NT S PT P + N+EHLR +LR++
Sbjct: 3 TLTPNADIFHAKRRRFTCNTHTSTLIPTKPLSVSPARKTNKEHLRNLENVLRTS 56
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 30.3 bits (65), Expect = 0.92
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 293 LKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTV 460
L DGT+LC L N + P ++ S C+ NI FL A ++ +P E+ + +
Sbjct: 72 LVDGTVLCNLLNQLSPGSMRM--GGSFEPGCV-NIERFLAAMDEMTLPRFESLKAL 124
>At3g32270.1 68416.m04114 hypothetical protein similar to putative
replication protein A1 GB:AAC95163 GI:4006821 from
[Arabidopsis thaliana]
Length = 209
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = -1
Query: 534 VGSSLSAQCCKQITTELRFCLSHRSTV*KVSCAGTPNCLAASRKALIFSMHLKAIDDVLI 355
+G + + + + +LR C ++ K++C CLA+ ++AL FS + ++ +I
Sbjct: 134 IGEVENTRRTQNVVNDLRICFKLKN---KINCV--LECLASGKQALDFSQNYHSLGGGVI 188
Query: 354 FLIMFGWML 328
++ W L
Sbjct: 189 VAVLGWWKL 197
>At3g02140.1 68416.m00182 expressed protein
Length = 319
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 340 EHDQKDQHIVDGLQVHGEYQRFPRSRK 420
E D+KD + GL ++G++ PRSRK
Sbjct: 57 EEDEKDVELTLGLSLNGQFGTDPRSRK 83
>At1g63640.2 68414.m07198 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1065
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQE 445
D L+DGT+LC L N + P ++ + A I FL A ++ +P E
Sbjct: 65 DELRACLRDGTVLCSLLNQLSPGSMRMGGSFEPA---SVKIERFLTAMDEMALPRFE 118
>At1g63640.1 68414.m07197 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1064
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 275 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQE 445
D L+DGT+LC L N + P ++ + A I FL A ++ +P E
Sbjct: 65 DELRACLRDGTVLCSLLNQLSPGSMRMGGSFEPA---SVKIERFLTAMDEMALPRFE 118
>At2g06690.1 68415.m00747 hypothetical protein includes At2g06610,
At5g28266, At3g42620, At4g07696, At2g06690, At2g16160,
At2g05480, At2g12140, At1g45080, At2g16330
Length = 253
Score = 28.3 bits (60), Expect = 3.7
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 129 MANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPRT-PQGIWTTS 284
+A+NR +S A R+I S YS+ + EWI + T R +GI TTS
Sbjct: 43 LADNRGMRSRIEATINRRIASFYSDCIREN--EWIIINTFSVRLHDEGIHTTS 93
>At4g15830.1 68417.m02408 expressed protein
Length = 296
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -1
Query: 504 KQITTELRFCLSHRSTV*KVSCAGTPNCLAASRKALIFSMHLKAIDDVLIFLIM 343
K I ++ + RS + K S + A + L+ HLK++DD+L+ L+M
Sbjct: 102 KLIVVMVKAMKNPRSALCKTSIMTCSDIFTAYGEKLLEGPHLKSMDDLLLQLLM 155
>At4g04920.1 68417.m00715 expressed protein
Length = 1250
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 130 WQTTERPNQDLQLKPRERSTANTARSWPTSPWNGF 234
W+ T P LQ P+ + + S +S W GF
Sbjct: 347 WEVTPGPGNGLQATPKISTGSRVPPSLSSSSWTGF 381
>At2g27760.1 68415.m03364 tRNA isopentenyltransferase 2 / IPP
transferase 2 (IPT2) identical to tRNA
isopentenyltransferase (IPT2) [Arabidopsis thaliana]
GI:14279058; identical to cDNA tRNA isopentenyl
transferase GI:12383201;
Length = 466
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 269 DMDNFYEVLKDGTLLCKLANNIHPNMIKKIN 361
D+ + YE+LK+ L AN IHPN +KIN
Sbjct: 163 DLSHGYELLKE--LDPVAANRIHPNNHRKIN 191
>At2g45880.1 68415.m05706 glycosyl hydrolase family 14 protein
similar to beta-amylase GI:13560977 from [Castanea
crenata]
Length = 691
Score = 25.0 bits (52), Expect(2) = 7.1
Identities = 13/62 (20%), Positives = 24/62 (38%)
Frame = +1
Query: 313 VQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRKTVGCTGTGNFSNCRPVGETESQLR 492
+ ++ + +D+H G + E+ + VG G G RP+ E E
Sbjct: 22 MDVKEEDDGDRRNRDKHAASGSSSNDEFMFQQSMQDQVGTPGGGGSRRSRPLEEKERTKL 81
Query: 493 RD 498
R+
Sbjct: 82 RE 83
Score = 20.6 bits (41), Expect(2) = 7.1
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 496 DLLAALGREAG 528
D++AAL REAG
Sbjct: 113 DVIAALAREAG 123
>At1g63750.1 68414.m07214 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1131
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -3
Query: 559 LSVLLTASRRFQ-PLCPVLQADHDGVEILSLPQVDSLKSFLCRYTQLSCGFEESVDILHA 383
LS+LL Q +C V+ HD + ++ + LCR SC ++E DI+
Sbjct: 884 LSILLPLGGNSQFMVCVVISPRHD------ITKMSNESELLCRINGESCSYDEEFDIVDV 937
Query: 382 LEGHRRCVDLF 350
R + +F
Sbjct: 938 SNCRREHLFIF 948
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,600,388
Number of Sequences: 28952
Number of extensions: 296678
Number of successful extensions: 909
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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