Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0833
(674 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 23 1.7
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 23 1.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.3
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 22 4.0
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 22 4.0
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 22 4.0
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 22 4.0
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 22 4.0
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 22 4.0
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 21 7.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.2
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 21 9.2
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 21 9.2
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 9.2
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 518 FLYKRSNIIPEFYPYSEEKPCNTSERSRHVLGL 616
F YK NI PYS EKP + + + G+
Sbjct: 16 FFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGV 48
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 518 FLYKRSNIIPEFYPYSEEKPCNTSERSRHVLGL 616
F YK NI PYS EKP + + + G+
Sbjct: 16 FFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGV 48
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -1
Query: 413 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 312
P + + G MDSN + A+Y+++ + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -1
Query: 413 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 312
P + + G MDSN + A+Y+++ + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -1
Query: 413 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 312
P + + G MDSN + A+Y+++ + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -1
Query: 413 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 312
P + + G MDSN + A+Y+++ + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 559 WIKLGNNVGSLIKKMGVY 506
WI+ G + G L+ +GVY
Sbjct: 250 WIERGADPGKLVLGLGVY 267
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = -3
Query: 279 SFWNTLPVKDD 247
SFW++LP+K++
Sbjct: 525 SFWDSLPIKEN 535
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = -3
Query: 279 SFWNTLPVKDD 247
SFW++LP+K++
Sbjct: 525 SFWDSLPIKEN 535
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = -3
Query: 279 SFWNTLPVKDD 247
SFW++LP+K++
Sbjct: 525 SFWDSLPIKEN 535
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = -3
Query: 279 SFWNTLPVKDD 247
SFW++LP+K++
Sbjct: 525 SFWDSLPIKEN 535
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = -3
Query: 279 SFWNTLPVKDD 247
SFW++LP+K++
Sbjct: 525 SFWDSLPIKEN 535
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 80 RDPATDQLINYKKTLKDSPGFIT-TKSGAPVGI 175
+ P++ ++ + T SPGF+T TK+ V +
Sbjct: 65 KSPSSPRISSPSSTKSGSPGFLTYTKADRDVDL 97
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 286 HAKGAGAFGYFEVTHDI 336
+ + AG Y+E+ H+I
Sbjct: 1670 YTRAAGFLAYYEICHNI 1686
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 32 KQRTPHSKKGTYKMASRDPATDQL 103
+Q+ PH KG + DP + QL
Sbjct: 318 EQQVPHIVKGNQWLGFDDPKSIQL 341
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 32 KQRTPHSKKGTYKMASRDPATDQL 103
+Q+ PH KG + DP + QL
Sbjct: 318 EQQVPHIVKGNQWLGFDDPKSIQL 341
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 471 ELYSKTSRVTNSISRSTLSTNC*ESNSNRCP 379
+L KT TN+ + S S + +N+N P
Sbjct: 996 KLCDKTETHTNNRTHSATSNSSVNANTNNIP 1026
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,352
Number of Sequences: 336
Number of extensions: 4007
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -