Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0833
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catal... 158 3e-39
Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2 prot... 158 4e-39
AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical ... 158 4e-39
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 157 9e-39
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 157 9e-39
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 157 9e-39
AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical... 156 1e-38
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 32 0.32
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 32 0.32
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 3.0
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 3.0
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 3.0
U89308-1|AAB48626.1| 136|Caenorhabditis elegans ribosomal prote... 27 9.2
AF078157-7|AAG24077.2| 285|Caenorhabditis elegans Hypothetical ... 27 9.2
AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical ... 27 9.2
AF003143-5|AAK68266.1| 136|Caenorhabditis elegans Ribosomal pro... 27 9.2
>U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catalase
protein.
Length = 496
Score = 158 bits (384), Expect = 3e-39
Identities = 73/112 (65%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 DRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSAD 435
DRERIPERVVHAKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSAD
Sbjct: 61 DRERIPERVVHAKGAGAHGYFEVTHDITKYGKADMFHKVGKQTPLLVRFSTVAGESGSAD 120
Query: 436 TVRDPRGFAVKFYTDDGVWDLVGNILP-FSL*EIQHYSRVLSILRRETLQHI 588
TVRDPRGF++KFYT++G WDLVGN P F + + H+ + L+R H+
Sbjct: 121 TVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHM 172
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +3
Query: 510 TPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLF 662
TPIFFIRD FP+FIH KRNP TH++DP+ +DF RPE+I Q+++L+
Sbjct: 146 TPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESI-QVMFLY 195
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2
Query: 83 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMS 250
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMA 58
>Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2
protein.
Length = 497
Score = 158 bits (383), Expect = 4e-39
Identities = 73/112 (65%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 DRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSAD 435
DRERIPERVVHAKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSAD
Sbjct: 61 DRERIPERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSAD 120
Query: 436 TVRDPRGFAVKFYTDDGVWDLVGNILP-FSL*EIQHYSRVLSILRRETLQHI 588
TVRDPRGF++KFYT++G WDLVGN P F + + H+ + L+R H+
Sbjct: 121 TVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHM 172
Score = 74.5 bits (175), Expect = 6e-14
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +3
Query: 510 TPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLF 662
TPIFFIRD FP+FIH KRNP TH++DP+ +DF RPE+IHQ+++L+
Sbjct: 146 TPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLY 196
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2
Query: 83 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMS 250
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMA 58
>AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.6 protein.
Length = 497
Score = 158 bits (383), Expect = 4e-39
Identities = 73/112 (65%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 DRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSAD 435
DRERIPERVVHAKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSAD
Sbjct: 61 DRERIPERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSAD 120
Query: 436 TVRDPRGFAVKFYTDDGVWDLVGNILP-FSL*EIQHYSRVLSILRRETLQHI 588
TVRDPRGF++KFYT++G WDLVGN P F + + H+ + L+R H+
Sbjct: 121 TVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHM 172
Score = 74.5 bits (175), Expect = 6e-14
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +3
Query: 510 TPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLF 662
TPIFFIRD FP+FIH KRNP TH++DP+ +DF RPE+IHQ+++L+
Sbjct: 146 TPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLY 196
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2
Query: 83 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMS 250
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMA 58
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 157 bits (380), Expect = 9e-39
Identities = 71/112 (63%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 DRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSAD 435
DRERIPERVVHAKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSAD
Sbjct: 61 DRERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSAD 120
Query: 436 TVRDPRGFAVKFYTDDGVWDLVGNILP-FSL*EIQHYSRVLSILRRETLQHI 588
T RDPRGFA+KFYT++G WDLVGN P F + + H+ + +R H+
Sbjct: 121 TARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHL 172
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +3
Query: 510 TPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLF 662
TPIFFIRDP FP+FIHTQKRNP THLKDP+M +DF RPE +HQ+++LF
Sbjct: 146 TPIFFIRDPIHFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLF 196
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2
Query: 83 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMS 250
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMA 58
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 157 bits (380), Expect = 9e-39
Identities = 71/112 (63%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 DRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSAD 435
DRERIPERVVHAKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSAD
Sbjct: 61 DRERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSAD 120
Query: 436 TVRDPRGFAVKFYTDDGVWDLVGNILP-FSL*EIQHYSRVLSILRRETLQHI 588
T RDPRGFA+KFYT++G WDLVGN P F + + H+ + +R H+
Sbjct: 121 TARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHL 172
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +3
Query: 510 TPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLF 662
TPIFFIRDP FP+FIHTQKRNP THLKDP+M +DF RPE +HQ+++LF
Sbjct: 146 TPIFFIRDPIHFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLF 196
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2
Query: 83 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMS 250
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMA 58
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 157 bits (380), Expect = 9e-39
Identities = 71/112 (63%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 DRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSAD 435
DRERIPERVVHAKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSAD
Sbjct: 61 DRERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSAD 120
Query: 436 TVRDPRGFAVKFYTDDGVWDLVGNILP-FSL*EIQHYSRVLSILRRETLQHI 588
T RDPRGFA+KFYT++G WDLVGN P F + + H+ + +R H+
Sbjct: 121 TARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHL 172
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +3
Query: 510 TPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLF 662
TPIFFIRDP FP+FIHTQKRNP THLKDP+M +DF RPE +HQ+++LF
Sbjct: 146 TPIFFIRDPIHFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLF 196
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2
Query: 83 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMS 250
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMA 58
>AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical
protein Y54G11A.13 protein.
Length = 512
Score = 156 bits (379), Expect = 1e-38
Identities = 72/112 (64%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Frame = +1
Query: 256 DRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSAD 435
DRERIPERVVHAKG GA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSAD
Sbjct: 76 DRERIPERVVHAKGGGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSAD 135
Query: 436 TVRDPRGFAVKFYTDDGVWDLVGNILP-FSL*EIQHYSRVLSILRRETLQHI 588
TVRDPRGF++KFYT++G WDLVGN P F + + H+ + L+R H+
Sbjct: 136 TVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHM 187
Score = 74.5 bits (175), Expect = 6e-14
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +3
Query: 510 TPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLF 662
TPIFFIRD FP+FIH KRNP TH++DP+ +DF RPE+IHQ+++L+
Sbjct: 161 TPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLY 211
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 44 PHSKKGTYKMASRDP-ATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALL 220
PH T P A DQL Y+ ++ P +TT +GAP+ KTA+ T G+ GP L+
Sbjct: 5 PHMVNLTVNDTKPGPMAEDQLKAYRDRNQE-PHLLTTSNGAPIYSKTAVLTAGRRGPMLM 63
Query: 221 QDVNFLDEMS 250
QD+ ++DEM+
Sbjct: 64 QDIVYMDEMA 73
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 86 PATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSLTGS 265
P T Q +NY LK SP ++ +SG P+ +T + FLD++ + S
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDKS 288
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 86 PATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSLTGS 265
P T Q +NY LK SP ++ +SG P+ +T + FLD++ + S
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDKS 288
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 482 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 393
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 482 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 393
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 482 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 393
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 1070 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1099
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 482 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 393
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 1048 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1077
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 482 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 393
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 482 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 393
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278
>U89308-1|AAB48626.1| 136|Caenorhabditis elegans ribosomal protein
L27 homolog protein.
Length = 136
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 264 LPVKDDISSRKLTSCNKAGPFLPTVCIAVLIPT 166
L V D+ +K+ NK PFL V L+PT
Sbjct: 51 LKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPT 83
>AF078157-7|AAG24077.2| 285|Caenorhabditis elegans Hypothetical
protein F25E5.6a protein.
Length = 285
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 342 LGDVMSYFKVPKXXXXXSMYHSFWNTLPVKDD--ISSRKLTSCNKAGP 205
L D +SY ++ S Y+ W+T+P ++ + K+ +K+GP
Sbjct: 138 LVDALSYLEIKLRKFRLSAYNPHWSTIPCLEEFLLLENKICLADKSGP 185
>AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical
protein F25E5.6b protein.
Length = 406
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 342 LGDVMSYFKVPKXXXXXSMYHSFWNTLPVKDD--ISSRKLTSCNKAGP 205
L D +SY ++ S Y+ W+T+P ++ + K+ +K+GP
Sbjct: 138 LVDALSYLEIKLRKFRLSAYNPHWSTIPCLEEFLLLENKICLADKSGP 185
>AF003143-5|AAK68266.1| 136|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 27 protein.
Length = 136
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 264 LPVKDDISSRKLTSCNKAGPFLPTVCIAVLIPT 166
L V D+ +K+ NK PFL V L+PT
Sbjct: 51 LKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPT 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,464,349
Number of Sequences: 27780
Number of extensions: 358830
Number of successful extensions: 1033
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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