Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0830
         (595 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    29   4.8  
BT029081-1|ABJ17014.1|  339|Drosophila melanogaster IP10546p pro...    28   8.3  
AE014296-2627|AAF49545.1|  339|Drosophila melanogaster CG13075-P...    28   8.3  

>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +3

Query: 168 RSAECMNQMSETAVPLVLSSITIATTSH 251
           +  EC  Q+S  ++ LV+S+IT+AT +H
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTH 728


>BT029081-1|ABJ17014.1|  339|Drosophila melanogaster IP10546p
           protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 149 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSRFEC 6
           PS  +C N+    A ++E    +L V     G   QC+  S  +++ C
Sbjct: 56  PSGTVCSNSDSVCALISEVNSTILDVCGGSGGNGAQCEVCSSGAKYAC 103


>AE014296-2627|AAF49545.1|  339|Drosophila melanogaster CG13075-PA
           protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 149 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSRFEC 6
           PS  +C N+    A ++E    +L V     G   QC+  S  +++ C
Sbjct: 56  PSGTVCSNSDSVCALISEVNSTILDVCGGSGGNGAQCEVCSSGAKYAC 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,554,995
Number of Sequences: 53049
Number of extensions: 543056
Number of successful extensions: 1351
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)