Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0829
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    25   2.4  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    25   2.4  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   4.1  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   4.1  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   4.1  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       24   5.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.2  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   9.5  
AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative odorant-b...    23   9.5  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -2

Query: 566 GRTESCRSRTKRN-RHDLTARRSAE 495
           GRTES  ++T+R  RH+   +++AE
Sbjct: 182 GRTESDNAKTRRRARHNTRTKKAAE 206


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -2

Query: 566 GRTESCRSRT-KRNRHDLTARRSAE 495
           GRTES  ++T +R RH+   +++AE
Sbjct: 182 GRTESDNAKTRRRTRHNTRTKKAAE 206


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 290 LALRTGACRVWTGSGCGRCRVWSM 361
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 354 QTRHRPHPLPVQTRHAPVLRANPYSEVT 271
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 354 QTRHRPHPLPVQTRHAPVLRANPYSEVT 271
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = -2

Query: 371 NARTSTRPGTGR--IRFPSKPDTPRSSEPILIPKLRIQFADSLTYIILSTRGSS--PW-- 210
           N  TSTRPG     +   S+       +  ++P+     AD+   + + T   S  P   
Sbjct: 410 NRPTSTRPGNNLNDVLIFSRFQNETMEQTTVVPEA----ADTTEPLTIETTSQSFVPLTN 465

Query: 209 RPAADMGTNRRDISTYIP 156
           RP+  +G  +RD+S  +P
Sbjct: 466 RPSGRVGRTKRDVSYKVP 483


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 578 PLNGGRTESCRSRTKRNR 525
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 159 PSPEFSRSAESIRTPPQMRCSSRSEPY 79
           P P  + + E    PP++ C+   E Y
Sbjct: 39  PEPSTTEATEEESPPPKIECTDPREVY 65


>AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative
           odorant-binding protein OBPjj11 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 594 HGQGESDCLI-KTKHCDGPRGC*RNVISAQC 683
           +GQ ++D L+ + ++ DGP  C R+    QC
Sbjct: 95  YGQEKADELVARCRNNDGPDACERSFRLLQC 125


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,655
Number of Sequences: 2352
Number of extensions: 16071
Number of successful extensions: 40
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)