Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0829
         (720 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093754-1|AAH93754.1|  587|Homo sapiens hypothetical protein LO...    31   5.5  
BC093752-1|AAH93752.1|  587|Homo sapiens hypothetical protein LO...    31   5.5  
AF131737-1|AAD20026.1|  587|Homo sapiens Unknown protein.              31   5.5  
AC079353-1|AAY24034.1|  423|Homo sapiens unknown protein.              31   5.5  
Z97055-2|CAI20388.1| 1501|Homo sapiens protein ( Human DNA seque...    30   9.6  
Z82201-1|CAI20274.1| 1501|Homo sapiens protein ( Human DNA seque...    30   9.6  
AL118498-1|CAI19709.1| 1501|Homo sapiens protein ( Human DNA seq...    30   9.6  
AL031843-1|CAI19936.1| 1501|Homo sapiens protein ( Human DNA seq...    30   9.6  
AL023801-1|CAI22791.1| 1501|Homo sapiens protein ( Human DNA seq...    30   9.6  

>BC093754-1|AAH93754.1|  587|Homo sapiens hypothetical protein
           LOC51057 protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 44  SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 175
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>BC093752-1|AAH93752.1|  587|Homo sapiens hypothetical protein
           LOC51057 protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 44  SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 175
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AF131737-1|AAD20026.1|  587|Homo sapiens Unknown protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 44  SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 175
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AC079353-1|AAY24034.1|  423|Homo sapiens unknown protein.
          Length = 423

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 44  SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 175
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>Z97055-2|CAI20388.1| 1501|Homo sapiens protein ( Human DNA sequence
           from clone RP3-388M5 on chromosome 22. ).
          Length = 1501

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 344 TGRIRFPSKPDTPRSSEPILIPKLRIQFADSLTYIILSTRGSSPW 210
           TG+    SK +  R     L+P  R QF D L  I LST G+ P+
Sbjct: 84  TGQNLTVSKSELRRIITDFLMPLTREQFQDVLAQIPLSTSGTVPY 128


>Z82201-1|CAI20274.1| 1501|Homo sapiens protein ( Human DNA sequence
           from clone RP3-345P10 on chromosome 22. ).
          Length = 1501

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 344 TGRIRFPSKPDTPRSSEPILIPKLRIQFADSLTYIILSTRGSSPW 210
           TG+    SK +  R     L+P  R QF D L  I LST G+ P+
Sbjct: 84  TGQNLTVSKSELRRIITDFLMPLTREQFQDVLAQIPLSTSGTVPY 128


>AL118498-1|CAI19709.1| 1501|Homo sapiens protein ( Human DNA
           sequence from clone RP1-185D5 on chromosome 22. ).
          Length = 1501

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 344 TGRIRFPSKPDTPRSSEPILIPKLRIQFADSLTYIILSTRGSSPW 210
           TG+    SK +  R     L+P  R QF D L  I LST G+ P+
Sbjct: 84  TGQNLTVSKSELRRIITDFLMPLTREQFQDVLAQIPLSTSGTVPY 128


>AL031843-1|CAI19936.1| 1501|Homo sapiens protein ( Human DNA
           sequence from clone RP1-246D7 on chromosome
           22q13.1-13.33.ontains GSSs.  ).
          Length = 1501

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 344 TGRIRFPSKPDTPRSSEPILIPKLRIQFADSLTYIILSTRGSSPW 210
           TG+    SK +  R     L+P  R QF D L  I LST G+ P+
Sbjct: 84  TGQNLTVSKSELRRIITDFLMPLTREQFQDVLAQIPLSTSGTVPY 128


>AL023801-1|CAI22791.1| 1501|Homo sapiens protein ( Human DNA
           sequence from clone RP4-786D3 on chromosome 22q13.31-33.
           ).
          Length = 1501

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 344 TGRIRFPSKPDTPRSSEPILIPKLRIQFADSLTYIILSTRGSSPW 210
           TG+    SK +  R     L+P  R QF D L  I LST G+ P+
Sbjct: 84  TGQNLTVSKSELRRIITDFLMPLTREQFQDVLAQIPLSTSGTVPY 128


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,517,521
Number of Sequences: 237096
Number of extensions: 2390534
Number of successful extensions: 6582
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6571
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)