Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0828
         (595 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    74   4e-13
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   5.4  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   5.4  
Y09723-1|CAA70889.1|  803|Homo sapiens Miz-1 protein protein.          29   9.4  
BC126163-1|AAI26164.1|  803|Homo sapiens zinc finger and BTB dom...    29   9.4  
AL034555-3|CAB85445.1|  803|Homo sapiens zinc finger and BTB dom...    29   9.4  
AK223618-1|BAD97338.1|  803|Homo sapiens zinc finger and BTB dom...    29   9.4  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 73.7 bits (173), Expect = 4e-13
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = +2

Query: 350 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 460
           MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 127 TPLRPKPA*PNPARICSLWSPESRE 53
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 127 TPLRPKPA*PNPARICSLWSPESRE 53
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>Y09723-1|CAA70889.1|  803|Homo sapiens Miz-1 protein protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 149 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 42
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>BC126163-1|AAI26164.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 149 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 42
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>AL034555-3|CAB85445.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 149 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 42
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>AK223618-1|BAD97338.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 variant protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 149 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 42
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,331,253
Number of Sequences: 237096
Number of extensions: 1874974
Number of successful extensions: 5334
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5334
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)