Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0827
         (633 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0YR65 Cluster: Glycerophosphoryl diester phosphodieste...    32   10.0 
UniRef50_A2E353 Cluster: Putative uncharacterized protein; n=1; ...    32   10.0 

>UniRef50_A0YR65 Cluster: Glycerophosphoryl diester
           phosphodiesterase; n=1; Lyngbya sp. PCC 8106|Rep:
           Glycerophosphoryl diester phosphodiesterase - Lyngbya
           sp. PCC 8106
          Length = 1309

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 412 KAKEPI-VRSDALEVDYGTLTFTAVFPSISDLQLSNAEVFSYVHEI 278
           +AK+P+ VRSDA + DY   T   V   + D +    +    VHE+
Sbjct: 282 RAKQPLSVRSDAFDGDYEIPTMAEVIELVKDYEAETGKKVGIVHEL 327


>UniRef50_A2E353 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 417

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 628 MGSVPDPLPLNYYRVDIPNSNLTVEYHDVKTRGFDTIKIISF 503
           +G+ PDP+ L Y  ++   SN  V Y D KT+  +T+   +F
Sbjct: 165 IGNAPDPVTLKYSNIESCESNCGVLYFD-KTQASNTVSFCNF 205


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,694,696
Number of Sequences: 1657284
Number of extensions: 8693831
Number of successful extensions: 15868
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15868
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)